Clone Read LE_HBa0052N09_T7_81665

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0052N09_T7_81665
Primer
T7
ID from Seq. Facility
LE_HBa_052_N09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 963 raw
Sequence
>LE_HBa0052N09_T7_81665 (raw untrimmed)
TCACCATTTAATTGACGACATATATGAGGGAGCTTTTATTCTGAGTTGCGACGGGCTGTTGAATGTGTCGGATTGNGGGTNCACTGGAGAGGGATATAAC
GGTGGAAATTACAGGTGCTCATGCAGGGCAATGTTTTAATGCCTGTTAGTTCTTCGGTTCCTTCGACTTAGCTAGATGGATTAGCTGGAGTTTAGCAGTT
AGATTTCGGCGGAAATAGCGAGACCTGGGAGAACTATGTCTTTATGAAAAGTTTCAGGATCTACTGTAAACGTTGATTGA
ATAATACAACGCTGATTTTA
TTATCGAGTAAACAGTCGAACTCGTCCTTTAATACGAGTGGTCTGTCAGTAGCATAAGTCTCCAACTTAAGTGACGAAATACACTAAGCATTCCTATTAA
ATATGGAACATAATCGTATAGTACTCAAATCTCACTCACGAGGAATGATTGTATTGTCAATGTCATACAAGAATGAATGTCATGAAAAATATTCAATCCA
TTTATCGTTTACCTTCTATGGCTAGAATCCTGATATGGATTGGAACGACCCTGATTTATGATTCCTAGCTCAACGTATGCCCTCACTCGTACAGTAATAT
TGAACAGTGTACATTGCTCTCGTATATCTCCTCTTAATCGAGTTGAAAATGTTCTTAGAGTNTGTCTGCACTTGTCTGCCGTACATAAATCCTTCGATCT
TGATACGTCATGACCTACTGCGTACCTATAACAACTCAATTCACTGAGTAATTGCGACTCGACCTCAAGCTGTAGACTCATTACCANGTAGTACGCGAAA
CTCTAAGTCATTTACACTTGGTTGTATTACTTGTGAGATTCCTTCTCGCTCCCTCTCTCGTCTGCCTGCTTCAGTGTACTCGCACGGTATCTCTTCGGTT
GCATGATACTCTCGGCGTCCATTTCTCCTTACCTCGACTTCCTTAAATGATAACACTTCTCAG
>LE_HBa0052N09_T7_81665 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.5937
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0052N09
Clone
Clone name
hba-52n9
LE_HBa0052N09
C06HBa0052N09
P052N09
Clone type
BAC
Contamination
none
Estimated length
108,996
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found