Clone Read LE_HBa0055E18_T7_82019

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0055E18_T7_82019
Primer
T7
ID from Seq. Facility
LE_HBa_055_E18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1091 raw
Sequence
>LE_HBa0055E18_T7_82019 (raw untrimmed)
ATGTGAGTATCAACAGTAGAAACGTGCGATGGGGAGGGGCTCTCCGTCAAGATAGGATTGCGGTCCTGACGATACGCATATGCGTGCAGCAGAGGTATAG
GGTNTGAAGGTTATTACGTGTAATTCAGAGTGGGAGCGGAGGGTCCTGTAACAGCTGGGGNGTGACATAGGCTGAGTAATAATTCTGTCTCATCTATAGT
GCTGATATAGATCCGCCGAGCAGACATGCGACAGAACAACAGATTTCGCTGCAAAGTACGTGACGCACGGCATTTAGTTTAGAGCTCTGCNGCGCAGGAC
ANGAGGTCTCTATCGCGCGATCGATGCCTCATCACGCTCTGCTGCTCCGCTCCGGCGGCACTCTCTCTCTAGATCATCCTCTTCTCTCCTATGCATTTCC
GCATGCNACTCTCATTACTCTCTCTGCTCACTCTAGCGACGACTTGTATCAGCTACGCTATACCCTGGCGTGACATCTATCTTCNTATGCTGATACTTCG
GTCACTACTACTGGCGACGAAGACGATTATCAGTTTGATCANANTACTGATAATAATACATGACACCTCATAATAACACGCGNGTCTGTCTGTATCTTTA
CTCTCGCTACTCGTGTCCTCTTNCACATACTCTTCTCATGCTATCTTGTGNCATCAACTCATCTTACTTTTCCNGTCACTACTTATACCCTCACTCGATT
ACGCCACCTATATTCTGAATGCCCGACTAACCACTACTCTTCTCACTCNCNACCGCTGCCCTCTGCCTGACATGTATCACTCCACACTATGCTCCAGCGC
TCCATGCATCTCCGCACTGACATACATTCTATCATCTCCTGTTTATACTGGACGACACAGACTATTATCGTCTCATACGTTACATAACGNGTACAATGCC
TTACCGACACGTCTGTCTCACCAATACTTAACTCCGCGTCGACTACCGCGCTCGCAGCACACACGCCTCTACCAACGCTCAACACTCTACCCATGACTGG
TTTCGTATCNTTCCTTATCTCTTATTCCTTGCTTCGCTTTACTTTCTCCTCGTATGTCTCTTTNTCTCTCATCTTCGTTGTATCTGCTGAT
>LE_HBa0055E18_T7_82019 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0055E18
Clone
Clone name
hba-55e18
LE_HBa0055E18
P055E18
Clone type
BAC
Contamination
none
Estimated length
112,057
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found