Clone Read LE_HBa0055M10_T7_82387

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0055M10_T7_82387
Primer
T7
ID from Seq. Facility
LE_HBa_055_M10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 850 raw
Sequence
>LE_HBa0055M10_T7_82387 (raw untrimmed)
ACCCCCGGGCCCGGGGGACCCCTAGGAGCGACCGGCAGGCTCGCAGCAGCTCGTCCTCAAGTCACTGGCCATAAAGGGGNNNNNNGNNNGNNNNGNNNNN
NNGAGGAACCTAAAGGGGGNNGNNGANNNNNNGNNNNNNNNNNNNNNNNNNGNNNNNNNGNNNAGGGAGNNNGNNNNNNNTCAGAAGGGGGNNNNGNNNN
NNNANNNGGNNNANNNNNNGNGGNGNANNNNNNNGNNNGGANGGGNNNNGGAGGGGGGGNNGGGGAGGAGNAAGAGAAAAAGGAGAAAGGAGGGAGAGAG
AANAAAGAAGGGAGAGANAGGGAGGAAGAAGAG
GAAGAAGAGGAAGGAGAAGAAGAGGANNAGGAAGANGANGANNGAGAGGANNAAGAAGAGGGGAGAG
AAGGAAGAGAGGAGGAAGAGGANGANGAGAGAGGAGGGGGAGAGGGGGAGAGAAAGAAGAGAAAAGAAGGGAGGGANGAAAAAGAAAAGGAGAAAAGAAA
AAAAGGGGAGGGGGAGGANGANGAAGAGGAAGGGGAGGAGGAAGGAGGAGAAAAGAGAAAAGAAGAAGGAGAGAAGAGAAAAAGAGAGGAAAGAGGAAAG
AGNGAAGGAAGAAGGGAGNAAGAAANAGAAGAGAGGGAGGGAGAGAGAGGAAAGAAAGAAGGNGAGAAAGAAAGGGGAGAAAGGGGGAAAGGGGGGGGGA
AGAGAAGGAGGAGAGGGNAGGGGGGAAAGAAAAGGAAAGGNANGAGGAAGGAAAGAAGAAGGAAGGGGAAGGGGAAGAGANAAAGGGAAGAGGAAAGGGG
GNAGAAGGGAGGAGAGAAGAAGAAGAGGAAGAAAGAGAGAAGAAANAAAA
>LE_HBa0055M10_T7_82387 (trimmed for quality and cloning vector)
GAAG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.41777
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0055M10
Clone
Clone name
hba-55m10
LE_HBa0055M10
P055M10
Clone type
BAC
Contamination
none
Estimated length
120,783
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found