Clone Read LE_HBa0060H01_T7_82897

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0060H01_T7_82897
Primer
T7
ID from Seq. Facility
LE_HBa_060_H01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
18 trimmed for vector and quality, 822 raw
Sequence
>LE_HBa0060H01_T7_82897 (raw untrimmed)
TCCTCTACTCAGATTTTTAGCAAGACCATTAACCATACTAGTAAGACACCCCTTTCATAGAGGAGCCACAANCCACAAAAAGGGAGGNGCCCAANCNCNA
CCACNCCCAAAACAACAACACAAAAAAGTACAACNCCNCCNCTTCCCAACACAAAACAACACCACACCAAAAAAACACCAACACAACAACACAACACAAC
ACNNCACCANCACCACCCCAAACANNANNCACAACAACACACCAAAACACNCAACAACCCCCCCACAACACACACCACCAAACACACACACCAAAACAAC
ACACCCCCCACACAACNCCCCCNAAAAACAACCAAAAACCCCACAAAAACACACACACAAACACACCACANACCAAACAACACCACCACACCCCAACCCC
TTTTTTCACCTCTCTCACCACACTCACCTCAAAAACATCACTCATATATAAATCAATTTTTTTTTTTATTACCCCCCCCCCCCTTTTTTTCTTTTTTTTT
TTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTCTT
TTTTTTTTTTTTTTTTTTCTTTTTTTTTTCTTTATTTTTTTTTTTTTTTTTCTT
TTTTTATTTCTTTCTCCTTCTCTATTCCTCTTACTCTCTTCTTACACCTACTACTTTCCTAACATCCTCCTTTCTTTATTCNCCTATCTCTTTTTACTTT
TTTTTTTTTCCTTCATTTATTTTTTCTTTTTTTTTTTTATTTATTTTTTTTTTTTATTTTTCTTTTTTTTCACACTTCATATCTACACACTACTCACTCC
CATCCCTCCCTCTCCACCATTC
>LE_HBa0060H01_T7_82897 (trimmed for quality and cloning vector)
TTTTTTTTTTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.38765
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0060H01
Clone
Clone name
hba-60h1
LE_HBa0060H01
P060H01
Clone type
BAC
Contamination
none
Estimated length
81,555
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found