Clone Read LE_HBa0060L24_T7_83135

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0060L24_T7_83135
Primer
T7
ID from Seq. Facility
LE_HBa_060_L24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 734 raw
Sequence
>LE_HBa0060L24_T7_83135 (raw untrimmed)
TCGGGCCCAAAGCCTCAAATGGGGGAAAGGGGGGCCCGCGCAACACATCCTCCCCACAATTAACTGGTAATGTGTATCCCTAAAATTTGCCCTTATTGGG
GAGGCAGGGTGAGAGACCTCGAATTTAATGCGTCCAAACATCCCCAATACAAGTTGGAAGGGACTGTAATGTGAATTTTTCTCCTATTTCTCGCTATTTC
TTTTGCTCCGAATCGAAGCGTTCGGGAAGTCGGGTTTAACGTCTCCACCCCCCCCCGCATATTCAAGTGTATCCCCCCTTCCACCCCCACCGGCNNNNNN
NNNNNNNNNNNTCCNNNNNNNNNNNNNTTNNTNTNNNTNNNTCCCCTNTNTTTTNTTTNTTTTTTNTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTT
TTTTTCCCCNTNTNNNTTNNNNTTTTNTNNTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGTTTTCCCTTTTTTTTNTTTTTTTTTNTT
TTTTTTNTTTTAGTCTNTTTTTTTTACCCTTTATNTTANTTTATTATTTTTTTATTTTTTATATAATTTATATATATCTTNATTTATATTTTTATATATT
ACCGAATTATTTTATATTAAAATATATTTAAATTATTATTTTATTTTTATATTTTTTTATTTTTNATTNTTTTTTTTTTTTTTTATTTTATTTTATTATT
ATATTTTATTTGTTCTCCCGCCGCTTTTTTTTTT
>LE_HBa0060L24_T7_83135 (trimmed for quality and cloning vector)
TTTTTTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.677264
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0060L24
Clone
Clone name
hba-60l24
LE_HBa0060L24
P060L24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found