Clone Read LE_HBa0040F22_SP6_8346

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0040F22_SP6_8346
Primer
SP6
ID from Seq. Facility
LE_HBa_040_F22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
579 trimmed for vector and quality, 762 raw
Genbank Accession
Sequence
>LE_HBa0040F22_SP6_8346 (raw untrimmed)
GGTTTTTAACGGGGTTAAAAAATATTGGATAACCTTATTTTAGTAACCTGTTTAAAATACCTTAATTATAATTCAAAAGTAAGGAAAATCTCCATAATCA
CTGATAAGAAATGTAAAGACAGTTAGGATACGGTATAATTCGATTTTATATATTATTGATTTGGTTTATTTGTTTTCGACCTTTTATCAATTTTGGGTTA
ATTGATTTTTGTTCTTAACGGTTTGATTTTCAATTTTACTGATAAGAAGATGCTTATAAATAAATATAACTTCTACAATATTTTGACATGACAAGACAAT
AATATAACTTTACAGAACGCTCATAAAATAGGAACAATAATAACTACAACTAAAAGAACTATACATGCAATACAAAGAAAAATTAAGAGGAATAGGATTA
TTGGTGTTTTGTATAATGTGAAGTTGTGAACTCAAAGTAGTAAATTAGTACCGTCTTTAATGGGTTATTGATTTGCCCTATAACTCGATATTAAAAAATC
AAAATCAAACCGATAATATGATAATTTTTTTTATTTAACCATTAAAAACCTGTCGACCAAATAAAATTTTTTCAGTTCAATTATCGATAAATTCAATTTT
ATTTAGTTCAATTATCGATCAATTCCATTTTTATAAGCCTATTATTTTTTTTCACCCCAAACTGGGTGTTTTATTTCCTCCCAAATCTTTCAATATTTTT
TGGCTCTGGTATTTTTTTTAATGGTATTATTTTCCAGGGCCTAAACCCATTAAAAATTAAAC
>LE_HBa0040F22_SP6_8346 (trimmed for quality and cloning vector)
TAACCTTATTTTAGTAACCTGTTTAAAATACCTTAATTATAATTCAAAAGTAAGGAAAATCTCCATAATCACTGATAAGAAATGTAAAGACAGTTAGGAT
ACGGTATAATTCGATTTTATATATTATTGATTTGGTTTATTTGTTTTCGACCTTTTATCAATTTTGGGTTAATTGATTTTTGTTCTTAACGGTTTGATTT
TCAATTTTACTGATAAGAAGATGCTTATAAATAAATATAACTTCTACAATATTTTGACATGACAAGACAATAATATAACTTTACAGAACGCTCATAAAAT
AGGAACAATAATAACTACAACTAAAAGAACTATACATGCAATACAAAGAAAAATTAAGAGGAATAGGATTATTGGTGTTTTGTATAATGTGAAGTTGTGA
ACTCAAAGTAGTAAATTAGTACCGTCTTTAATGGGTTATTGATTTGCCCTATAACTCGATATTAAAAAATCAAAATCAAACCGATAATATGATAATTTTT
TTTATTTAACCATTAAAAACCTGTCGACCAAATAAAATTTTTTCAGTTCAATTATCGATAAATTCAATTTTATTTAGTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.893673
Expected error %
0.483267
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0040F22
Clone
Clone name
hba-40f22
LE_HBa0040F22
C03HBa0040F22
P040F22
Clone type
BAC
Contamination
none
Estimated length
67,212
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found