Clone Read LE_HBa0075O17_T7_85569

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0075O17_T7_85569
Primer
T7
ID from Seq. Facility
LE_HBa_075_O17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
63 trimmed for vector and quality, 754 raw
Sequence
>LE_HBa0075O17_T7_85569 (raw untrimmed)
CCCCCTTGCTGCAAGCTTGTGAGAATCTCTCAAGGGTTTGTTGTTACATTTATNTTAGAAAACAAATCTCCTCCATAAGGACATTCGTCGCTACCCGATA
AAATCACCGCGCACT
CTCTCAACTAATCCCTGTAGGAAAAGAAACATGATTACTTTTGAAGAACAACAATAGCACAAGAATGACAGCCTATATTGTCAAT
CTCTCATTTCCCTTGCAAAAGCAATAGCATCTGTCTGATAAACAAGATCAACAAATTGCTACAAGTTTAAGGACATGTCAAAAAGTTCCTCTGCTTTTTC
CCCTGAGGAAAAAGGGGGGACAATGTGGCGAGAGGAAGGGGGAAGTTCGAAATGTCAATTTACACATTAGCTCTTGCGCCCAAAATGACCAATTAACTAT
TACAGGACTCGTCAAAAGAACTGCTATACATCTTTAGTAAGAGAGGAAGAAGTCCATTGCACGACCAACGGACATGCTGTTGAAGCTCCTTGAGCCTAGT
TCATTGAACTGACATACTGTTGTTGCACCATCTTATAGAGCGTCTTCATTAACACTATCCATTCTGACGCTTCCAGCTTTCCAGTCAATAGAGCTACGAT
ACCCAGAAACTATCACTAACTATTGTGGCACCCGCTTGAGGAAGCAACGTAGGACGGATATACATTAATCTACAGAATGGGGCGTACTCTGTCTTTTCAC
TTGAACGACCTCCTTTTGTTTACTCTGGTGATAGATCTCTATCTCGTATCTGGC
>LE_HBa0075O17_T7_85569 (trimmed for quality and cloning vector)
CTCTCAACTAATCCCTGTAGGAAAAGAAACATGATTACTTTTGAAGAACAACAATAGCACAAG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.849526
Expected error %
1.29691
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0075O17
Clone
Clone name
hba-75o17
LE_HBa0075O17
P075O17
Clone type
BAC
Contamination
none
Estimated length
81,390
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found