Clone Read LE_HBa0075P08_T7_85599

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0075P08_T7_85599
Primer
T7
ID from Seq. Facility
LE_HBa_075_P08-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
47 trimmed for vector and quality, 754 raw
Sequence
>LE_HBa0075P08_T7_85599 (raw untrimmed)
TCCTTAACAGCGAACTTAAGCATCACGCTTATGCGGGCCATTTGATTCAAATCTCGTAGACAGATTAATTTCGGTTCAACCACATGGGATATTGATATTT
CAGTTAACAATTGCTATGGAATGCTATTACAACAGAATAGTCAGATGATTCCAAATTGGCCTTGGAATATGTTGTGGAAAACCAAGGCATCTGTGGAACT
AGCCTCATTTCGGTTGGTTACAATGTTGT
GAAAAGCGCGCTTCAAAGCGAGGCGACACCAGTGCGCTTCTTTCTCCTGAGGCGATGCTCTCTGAAAAATG
TGCTCGTTTCAAATAAATGAAGTAGAATCGACACTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATTACAAAATGCGACAACTACTTTACTTTTTTCAA
CAAATAGTCCTTTTCATTACAAACATAGTTTTTTTGTAGAATAAACTGAAATATACAATATAACTTAATGTCTCTATCACCAACTCTTACTACACTGCTT
CGCTCCTCTCGACCACCACCGACATCTGGTCCCTCCTTCTACCTCACACGGCCTCTACGTGCATCTTATTCTATTTTCCTATCTTATCCTTTTAATACCT
TTCTTCTCATCATACCGCTGCCCCTTCGCTTGGCTCCGTTGTTTCTTTGTTTGCCTTGCTGCTGTGTTTCTTTTATCATTTACTTCTGTCTCTTTCATCT
TTCAACTCCTCTACTCTTTACCGTCGTCTCCGCGTGCCTCCTTGTTCTGCTCCT
>LE_HBa0075P08_T7_85599 (trimmed for quality and cloning vector)
GAAAAGCGCGCTTCAAAGCGAGGCGACACCAGTGCGCTTCTTTCTCC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.804804
Expected error %
1.63487
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0075P08
Clone
Clone name
hba-75p8
LE_HBa0075P08
P075P08
Clone type
BAC
Contamination
none
Estimated length
50,928
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found