Clone Read LE_HBa0040L01_SP6_8592

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0040L01_SP6_8592
Primer
SP6
ID from Seq. Facility
LE_HBa_040_L01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
420 trimmed for vector and quality, 793 raw
Genbank Accession
Sequence
>LE_HBa0040L01_SP6_8592 (raw untrimmed)
GCGGGTTTAAAGGAGCTCGTTCTTCACGAAGTTAGAGCTGCAATTTCATTTTATATCTTTTCCCCTGTTCATAAGCTTTAATAAGCAAGTTGTAGAGTAA
GATATAGTTAGTTAGAAGACTCATACTTTTATAATCGCTAAATTCAATCAAAGAAGGCTAAACCTCGCAATGCATTGTCAGAAGAGTAACAAAATGATTC
AAAACACAAGGCTCATAGATTATACTTAGAAACTGGAGTATATGAGGTCTGTTAGCAAGATGAACAAAATGTACAAAGTTTTAGGTTTGGGGAGCAACTT
TTGAGATCCCACTCCTGTACGTTTGTATTGTGCCTCATTAGTTCGGTACTAATCATTAATGTTCGATGAAATAGCATCTCTGTCTAGCACACCTATATCC
TGGACATCGAAGATTAGTACCCACAAAAAGAGAGGGGGTGGAGTGGGTGGGGGATTCACCATATTATTACGAGTTCATCGTTCTCTCCGGCCACTTCTTC
TCATAGTCGGCTCCGCTGTTACCACACTCTCCTACTTTATAATCCAACTTTATCTCTTAGCCTCCTCATATCCCTCATTATCTTCCAGATACTCTCCTCT
CCCCTGAACACCCTCGAGCCTCCCTTTCTATTAGTATTCTTGTAACCTCTTTCACCCTACTTTCTCTCCTTTCTTCTCTGTCACCGCGTAAACCGCTCTA
AATCTCTAATCTTGTATAATCATCTTATTATTCCACATATATATTTTTACTTATTAACAAATTTATTAACTCATATACTTCTTAAATCCACTT
>LE_HBa0040L01_SP6_8592 (trimmed for quality and cloning vector)
TTAGAGCTGCAATTTCATTTTATATCTTTTCCCCTGTTCATAAGCTTTAATAAGCAAGTTGTAGAGTAAGATATAGTTAGTTAGAAGACTCATACTTTTA
TAATCGCTAAATTCAATCAAAGAAGGCTAAACCTCGCAATGCATTGTCAGAAGAGTAACAAAATGATTCAAAACACAAGGCTCATAGATTATACTTAGAA
ACTGGAGTATATGAGGTCTGTTAGCAAGATGAACAAAATGTACAAAGTTTTAGGTTTGGGGAGCAACTTTTGAGATCCCACTCCTGTACGTTTGTATTGT
GCCTCATTAGTTCGGTACTAATCATTAATGTTCGATGAAATAGCATCTCTGTCTAGCACACCTATATCCTGGACATCGAAGATTAGTACCCACAAAAAGA
GAGGGGGTGGAGTGGGTGGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.959634
Expected error %
0.0149462
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0040L01
Clone
Clone name
hba-40l1
LE_HBa0040L01
P040L01
Clone type
BAC
Contamination
none
Estimated length
79,481
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found