Clone Read LE_HBa0102I04_SP6_86790

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0102I04_SP6_86790
Primer
SP6
ID from Seq. Facility
LE_HBa_102_I04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
546 trimmed for vector and quality, 804 raw
Genbank Accession
Sequence
>LE_HBa0102I04_SP6_86790 (raw untrimmed)
CATAATAGAATATTAATTACGATTAAAAAATATAGAAAAACTTACGGTGATTTAAGTGTAAAAAAAAAAAAAAAGAGGAAGAAGATGAAGTTGGGTTGGG
GGGAAGCAGGTTTGAGCGGAGGCAGGAACATACATACATTAGAATTTTATTTTTTTAATTATAATTATTTTTAAGCACAAAAGATAGATTACTTTTTTTA
AGACACGTGGCTTCTTTTAATTAATTAGTTTGTCATGTCATGGCAAGTGCATCACACACACTTGACATTTTTTGTTAATTATTAAAATGTGTCTAATAGG
AAAAATTTTGTACAAGTAAAAGTGTTCAATAGGTAAAAGGTTAAATTGAGATGTCTAAATGAATAATGAGGACAACTTTAAGGGGTCACAGATGACTTTG
GCCTTTTAAAATATATGACAAAATCACAAGGATCTGTGATTTTGAAATTTTACTTTTCACTATCATTGATCTTTATATTTTGTCATCATTTATCTCAAAA
TTATTATATTTTATTTACCTATTTAAATGTAACTTTATATTTATACATGGTAGAATGATGTTTATGCAAGTAAATTTTATTGATTATTTTCGTTTTAGGG
GTATATTTTAGAAGAATGATAAAAAAAACAAGTCGATAAAATTGGACATATAACTTGTAGGATCCGGGTTAATTAGACCTTTGCCTACGATTCATCCTAT
TGGTTATAACTTTTAAGTACCGCTCTCTTACCCAACTGTATGTCTACTGACTTTCCTTCGCATAGACTAGAGCACAAAGTTCACCACGTGTCTCGAGTTT
CAAT
>LE_HBa0102I04_SP6_86790 (trimmed for quality and cloning vector)
ATTAAAAAATATAGAAAAACTTACGGTGATTTAAGTGTAAAAAAAAAAAAAAAGAGGAAGAAGATGAAGTTGGGTTGGGGGGAAGCAGGTTTGAGCGGAG
GCAGGAACATACATACATTAGAATTTTATTTTTTTAATTATAATTATTTTTAAGCACAAAAGATAGATTACTTTTTTTAAGACACGTGGCTTCTTTTAAT
TAATTAGTTTGTCATGTCATGGCAAGTGCATCACACACACTTGACATTTTTTGTTAATTATTAAAATGTGTCTAATAGGAAAAATTTTGTACAAGTAAAA
GTGTTCAATAGGTAAAAGGTTAAATTGAGATGTCTAAATGAATAATGAGGACAACTTTAAGGGGTCACAGATGACTTTGGCCTTTTAAAATATATGACAA
AATCACAAGGATCTGTGATTTTGAAATTTTACTTTTCACTATCATTGATCTTTATATTTTGTCATCATTTATCTCAAAATTATTATATTTTATTTACCTA
TTTAAATGTAACTTTATATTTATACATGGTAGAATGATGTTTATGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.90051
Expected error %
0.154446
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0102I04
Clone
Clone name
hba-102i4
LE_HBa0102I04
C12HBa0102I04
P102I04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found