Clone Read LE_HBa0102L21_T7_86969

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0102L21_T7_86969
Primer
T7
ID from Seq. Facility
LE_HBa_102_L21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1157 raw
Sequence
>LE_HBa0102L21_T7_86969 (raw untrimmed)
AGTACAATAGATAGCGTCCTTGGGTTAGATCTCTATCAGGGTGGATCGTGATGAGTTGTGCTCTAGCGTGGATAGTGACAAGCTGATAACCGACCCCCCC
GTGTTTAATACCACACATATATATCAGTATTGCAGGTTAGAGTGGTGGGGCCCCCTCTTAGCTCCTCTCTCACCTTCATGGGACGGGAGGTTCAATACAC
TGTAACATTAAGTCCACACTGGCTATGGTGCTTGCATCGCCACCTGCTCCCTATGCTCATTACTTCTCTGCTTGATCGTTGTTTCCTTTTGTTATCTTTA
TTATATCTTTGAAAAATCACTTGATTATCATATCCATACAACCACAATACATCCACGTTATTATACTTCTTACCGAATAAATAAGTGACATAATTGAATA
TCTAATCTTACGACATTAAAGTAAATAATTGCTAAGTAATAGTATATATCAAGTTCATATGTGTGTATATTGTAATAGTCAGAGTTACTGTATAATTATC
GCATTGTGTCACTCTCTACTTCCCCATCTATACCGTTGTTGTTATGTGGGACGTGTTTGACGTTGGATATCTGACATAAAGTTATTATATATAATATCTC
ACTCCTGTGCCGTGTATTATAATATATATACGACTTTGTAATTTTGTTACTATATCTTTACCCACTTGATTCTATTGCTTTATATGTTTGTTCTCACCTT
CTGTCTGAGTTTTACTATCTCTTTATTTTCCTAATACTAATCCCGCCTATCGATCATTTACTCACTCTTTTGTTTATCATATCTACCCAGACTCGCCACT
CATATATATGATCCTCTACACAAAATAGTATATAATTAATCTAGGAAATGATTTATATATATAACTACTATTCTTTATAGCTTTCTGATTCTTTTATTCT
TACTTTTGCCTCTATAATTCTATAATATTTCTTACTCATACTCATTGTAATTTATCTTTATACGTGTGATTCTACTACTTTTCCTAATCGTCTCTTCTTT
TTTTCTTACTCTTCTTTTCTGTCTGTAGTGTTAGTTTAGATTTTCTCTCTTATTGTATGTGTTTTCTATCTGTTGTTCTTGTAATTGCTCTTTTCTATGT
TCTCATGAATGATAATTCGTTAAGATATTAATTCTACCTATACTCTAACCGCTATAT
>LE_HBa0102L21_T7_86969 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0102L21
Clone
Clone name
hba-102l21
LE_HBa0102L21
P102L21
Clone type
BAC
Contamination
none
Estimated length
118,865
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found