Clone Read LE_HBa0120F05_SP6_87416

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120F05_SP6_87416
Primer
SP6
ID from Seq. Facility
LE_HBa_120_F05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
498 trimmed for vector and quality, 868 raw
Sequence
>LE_HBa0120F05_SP6_87416 (raw untrimmed)
AAGGGACTGGATCTCCTTCTTCATGTCTTGATGCCTTTAAGTTCCGGCATGGACTAGCTTTATATTTATTTCATTTTTGGGGATACTCTTAGAATTAGTA
ATTCGAGGATAGACTTTCTTGGGATGATGACTTCCAGATTTTGGGTATAATAATAAGTGTTTGAGTTTTAGAAGTTATTAATCTATTTTTATTAATGAGT
TTTAAGTCTTCCGCATTGCATTTCGTTCATTATGTTTGAAATGATGGGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGCTAAGTGTGGGTGCCCCTCA
CGACGCATTTTGGGTTGTGACAAATTATGACTAAGGCTTTGATGAAAAGTAATGAAATTCGTCCCATTGAATTTGATTTATTCCTTAAAAAGCAAATGTG
GTAGTACAAAATCCGCCCAATTGCTCAGTTCTATCATATAAATGCGGCAACGGTGAATACTAAGTTTTAAAGATGACAAGTGATTGACTGTATGAATACG
AGTGTAGATGAACAAAATTATAATAGTCATTCATATGATAATTATGAAAGGAAGATCTTTTGTGTTTTCTCCAATCTAGCCTTCTGTAATGTGAAAGTAA
TTTTTCTCAGCATTATGTTATGAATTGTCTTTCGGTCACATTGGTATTTGTGCAATCTTAATATTTTATTTATCCTTCTTTAATATTTATATTGAAATTA
TTTGAATTTACTCTTCTCTTCTAATATTTTTCTTTACAGTCGTTCTTAATTCTAGCCTTTATTGATTTATTTTCTATGATTATTTTTCCATTTTATTTAT
TTATTCTATATCTTCTATATACTTTCCCTTGTCTTACTTTAGTCTTTCTTCTTTGTTTCAATCTTTTG
>LE_HBa0120F05_SP6_87416 (trimmed for quality and cloning vector)
CTTCTTCATGTCTTGATGCCTTTAAGTTCCGGCATGGACTAGCTTTATATTTATTTCATTTTTGGGGATACTCTTAGAATTAGTAATTCGAGGATAGACT
TTCTTGGGATGATGACTTCCAGATTTTGGGTATAATAATAAGTGTTTGAGTTTTAGAAGTTATTAATCTATTTTTATTAATGAGTTTTAAGTCTTCCGCA
TTGCATTTCGTTCATTATGTTTGAAATGATGGGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGCTAAGTGTGGGTGCCCCTCACGACGCATTTTGGGT
TGTGACAAATTATGACTAAGGCTTTGATGAAAAGTAATGAAATTCGTCCCATTGAATTTGATTTATTCCTTAAAAAGCAAATGTGGTAGTACAAAATCCG
CCCAATTGCTCAGTTCTATCATATAAATGCGGCAACGGTGAATACTAAGTTTTAAAGATGACAAGTGATTGACTGTATGAATACGAGTGTAGATGAAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.951896
Expected error %
0.646652
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120F05
Clone
Clone name
hba-120f5
LE_HBa0120F05
P120F05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found