Clone Read LE_HBa0120H16_SP6_87534

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120H16_SP6_87534
Primer
SP6
ID from Seq. Facility
LE_HBa_120_H16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
650 trimmed for vector and quality, 825 raw
Sequence
>LE_HBa0120H16_SP6_87534 (raw untrimmed)
CTTTTTTGAACCCGGAGATGATGCTGAAATCGGCGGTGGTGATTGTAAATCTTCGAAGAGGGATCTCTTGCGCTTAATAATTGCAGCCATTGATTAATCT
CCCTTACAGTGATTCAGAGATTGATTGTTTGATCGGAGATTTGAGGAGTAGGGCGGTAGGTTTAGGGGATTTGAAACTTTTCTTGAGCGGTACGCCGCCT
GGAGGAGGTGAGTCCATTTATATAACAAGGATTTTGTGGACTGTTCAAAGCGGTAAACGTTGGCAAAAGGGATTTTAAAAAATGATACGTAAATATGTAT
TAAACTTATTTCAAATAATATTTATGTTTTTTAATTTTGGGTTCTTACAAATAAATATTTAAATTTATATAAAGTTAAATAAATATATGGAAAAGGGCCT
AAAATACCTTCAAAATATTAGAAATAGAACAAAATTACCCTTGATCCACCTATTGGCTCCAAAAATACCCTTTCCACCCACTTATTGGATCCAAAATATC
CTTCATCTACCTATTGGTTCAAAATAGACCACTTATTTAACGATTTTATGTTTAAACTATTTAAATATTTTTTAAAATACGTGGTGCTCAACTACTCGTT
ATAATTTAATTTGTTAGTATAATTTATAAATCAATCTATTACCCACCCAAAACTAATTAAACCCCTCCAACTTAATAAACTCGTCACATTATTTAATGCA
ACAAAAGAAAATCTACTGCCAATTTGAGTGTTTTTTAAAATTTGAGGCAAAAATATCCTACCGAAGTAAATTTTCCTTATTTCCAAGTTGTCTAAATTAA
AATTTTCGATAAAACTTTTAAGTCT
>LE_HBa0120H16_SP6_87534 (trimmed for quality and cloning vector)
GCTGAAATCGGCGGTGGTGATTGTAAATCTTCGAAGAGGGATCTCTTGCGCTTAATAATTGCAGCCATTGATTAATCTCCCTTACAGTGATTCAGAGATT
GATTGTTTGATCGGAGATTTGAGGAGTAGGGCGGTAGGTTTAGGGGATTTGAAACTTTTCTTGAGCGGTACGCCGCCTGGAGGAGGTGAGTCCATTTATA
TAACAAGGATTTTGTGGACTGTTCAAAGCGGTAAACGTTGGCAAAAGGGATTTTAAAAAATGATACGTAAATATGTATTAAACTTATTTCAAATAATATT
TATGTTTTTTAATTTTGGGTTCTTACAAATAAATATTTAAATTTATATAAAGTTAAATAAATATATGGAAAAGGGCCTAAAATACCTTCAAAATATTAGA
AATAGAACAAAATTACCCTTGATCCACCTATTGGCTCCAAAAATACCCTTTCCACCCACTTATTGGATCCAAAATATCCTTCATCTACCTATTGGTTCAA
AATAGACCACTTATTTAACGATTTTATGTTTAAACTATTTAAATATTTTTTAAAATACGTGGTGCTCAACTACTCGTTATAATTTAATTTGTTAGTATAA
TTTATAAATCAATCTATTACCCACCCAAAACTAATTAAACCCCTCCAACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.930612
Expected error %
0.302094
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120H16
Clone
Clone name
hba-120h16
LE_HBa0120H16
P120H16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found