Clone Read LE_HBa0120I01_T7_87553

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120I01_T7_87553
Primer
T7
ID from Seq. Facility
LE_HBa_120_I01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1164 raw
Sequence
>LE_HBa0120I01_T7_87553 (raw untrimmed)
GTTATATATAGGGTGGTGTTTGAGTTGAGTATCGGGGGGGATCCTCTTAGTAGTCGTACTCTGGCTGTGCGATAGCGACGCTTGTAGTTAGGTGGCAGTT
AATTATCTTGCTCTCCGGTGTGGGGATGCTCATTGCATTTTCTATCTATATTATCTCTTAGTTCTTATGCTCTATTGTGGTT
ATTCTCCTCATCGTTTGT
AAGTAGGGGAGGTTATGTATCTTATGCCTTTGTAAATTCTAGTTTTTATGGTTGCTTTCATTGATGTTCCCTATGTATCTATGTCCTTGCTAAGGTGTAT
GCTTTGAGTAGTCACCTTTGTGATATCTAACAGTGTCTAGTGATTCTGCATCATTAGCGGGGTGTACATCGAGGTGCTGTGTACTAATCAGTTTATGATA
CATATGGTGTTAAATACATCTAAGTGTCTTTTGTCTGTAACTTCTGGGATCATAACATGACAGGTATAACGCGAATATAATCGAGACTATAATACTTAGT
TCTCTATGCCTAATATTATTACGTATGATGCTGCGCGTATTTTAATGACATTATACGTATAATCGTCCCTTTATCAATTGTCGCGCATTATACCATAGCT
TTGTTTAGTATCCTTATTAGTATTACGTACGTTATTAAATTGTATATCTCATTTCTCATTTCTACTTCTTAGTTTACTCACTTCTAATTATTTTTTTTCT
ACTCATTAGAAAACTTTTCATGTTAACTTGAAGTGATGCTTACTTTCCATATATACGCTTACCCTCTCATTTTACAATGATTCCGTATAGTCCACATCTT
TATGTAGCCATGTTGAATAAATGTAATTCATATTGCGTATTGTTCTTTCACCTCCCACATCATCTAAGTGGCTACACTGTTTAGAGATTGTAGAAGATTA
TGGGTGTTTTTGAATATGTATGATCATCATTCATAGCTTATCTTTTGAGATATTATTTACAATTCAGTAATAAGAAAATGAAGAAAATGGTCTACCCCTT
TGAAACATGTGTAATGCACTTTATGTTTATCACTATATCCTAGAATCTCTGAAGATATATGTTTTATGATTTACGTTGGACGTTCCTTTTTGTATTATCT
TTGTTTTTTTACGTTGGCGTGTATTGTGTTGTCTAGTATTTTCTCCTTCTTTAGCAGATGTTTA
>LE_HBa0120I01_T7_87553 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.661011
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120I01
Clone
Clone name
hba-120i1
LE_HBa0120I01
P120I01
Clone type
BAC
Contamination
none
Estimated length
96,189
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found