Clone Read LE_HBa0120P15_T7_87917

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120P15_T7_87917
Primer
T7
ID from Seq. Facility
LE_HBa_120_P15-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1581 raw
Sequence
>LE_HBa0120P15_T7_87917 (raw untrimmed)
GCGCGCTCGACACAACTGAGCGGTCGTGCGGGGCGTGGCTAACGCCGCTAACGCAGATCTATAGCCTCGTCGCGAGCCGACTGACCAATGCCTTTGGCAG
TAAAGCGTGCTTATAACATCTCTGCACGCTCGCTCCCCTTTGTGGAGCTGGGAGATCTCGCGTTGGTATATGCATACGCATAGCACAACTATTCANATGA
AGAGGACTCCTCCTCGTTATATCAACCTCTCTGCAACCAAGATCGATAATTGCAGATCCTGCAATTGCGCTGTAGCAACAGAGTTACGTGAGTGGAGATA
ATGTATAAGGCACGTATCACAGTATGCTACTCTAGTGCCCCACAGACACTGGGCACCCGAAGCGTTTACTCTGGTGATAGCGTATGAGGAGATANGTTAT
ACGGTTGATAGTGCCTGTAGGCCACCTCACTCCACAAACTACCGACGCGCTGTGTCCCACATACCTAANGCANATGTCACCNGATCCTCGGNAGANAGAC
CGGCTCCTGACTCCTCATCGTCTCCGTGTGCTTGGATTGTAGTATATGCTATATCTACGATCTACTACAGCCTATGATGATGGGATGTANGTCAATGCGC
ATGTTACAGTAGTGAGACTCCGCATCCATCNCATATGACCTGATAATGATACTGATTATACTGCGTTATACGCCAGTCTTATATATGATGGATGATGTGA
CAATCTCGCTCTACTATACCACTTGCGGCTCGTCTTGTAAACTTCACTTGATTACTCTATCTGTGTGATGATTAGCTCATAGATAGTAGTTCTACANTGA
CATCTATAGCNCCCTTCATCTACCTTCTTAGCTAGTATCTCTCTCGNACCTATATGCTCTCCACGCAAGTAGGTAGATGCATCTACTCTACAATGTACTA
ATTGACTAATGTATTGTATATATCGGTAGTACGTAATGGTACCCGCAACTAGCGCTTCTCGCGCTGTCACTTCTTGCCCTTACGCGCGTCGTGATCGTCT
ATGGTTCGAGCGTGCTAACTACTGCATCCCGACTGCTGACGCTGTATATTGCCACTAGTGGTAGTTCGCGCTTTATAGTGTTGCTGCTTTCTTATACGTA
CCATATATACGCTGTGCCAGTGTGATGTGTCTATATACTATATGGTCTGCTCTTATTCATGGCGTTTGTGATGCGAGTAATGTACGTACGCCCTATGTAG
AGCACGATCTAGTGCTGCTCCTCTTGATCATGTGGTGCTATAGACGTAGAACTTAGTCGCTAACGCGTGTGCCTCTTTTCTGCATAGTGGCGTGATACTG
TCAACCANCTTGTTAGTATCTATGCTTATTGTCTATGTCGTTTTCTCCTTGTATCTTCTACCGTCATATTGCTATTACTATCCAAACCTTAGATANGTAG
CACTGCGTCATCTATATGCCGATGTNGCAGTAGTTANTGTCTATCGGACTGACGGTCCCATTACTCTTGTTGACTTTGCGCTACTNGCTCCACTATCGCC
TGCTCCACTTGCTTCATATCTTGCTGCATCGTGCCATCACTATAGCTGCTACTACTGGTCCCTATTCTAGTCGTCTTGTGA
>LE_HBa0120P15_T7_87917 (trimmed for quality and cloning vector)
G

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120P15
Clone
Clone name
hba-120p15
LE_HBa0120P15
P120P15
Clone type
BAC
Contamination
none
Estimated length
120,155
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found