Clone Read LE_HBa0047A14_SP6_8858

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047A14_SP6_8858
Primer
SP6
ID from Seq. Facility
LE_HBa_047_A14-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
724 trimmed for vector and quality, 899 raw
Genbank Accession
Sequence
>LE_HBa0047A14_SP6_8858 (raw untrimmed)
TTAGTCGTTACCCGANNNGNANNCNANNGCCNAGAAGATGTCATACACCTAATATTGAGTGTTGTCACTTGACAAAATCAATATGAAAATATCCAATGGG
TTCGAAATCTAGCATATACAAGGTTTTGAAAAACTTGTTTATCATCCTCATAAGGATTAAATAGATTCAAAATGCATAAATCATGTACAAGTATTGTTAT
GCAAGTTGATAACTATAATTGAAACTCTTGAAGAGTTTTCAAAAGGCAACAAATTATTTACTTAAAGAAGTTAAAGTAAGGAACTTAGAGAAATCTTTGA
CCCTGAAAGGAAGATTCATAAAAGGAGATAGAAGAAAGCATATTTCGTCAAGATTTTTCTACACTCATGAGCTCCCAAAAATGATGATATCATGTTTGTT
CAAATAATACTACATTGATTTATCCACCAAGTCTCTACCAACTACAACTTTCAAGAAGTTGATACTCAAGATTGGAAAACGAAGATCCAAGTCTCTTGAT
GTTTTATGAGGGTGAGTTAATACGCGATGTACTCTTTTTTCCTCACAAGGTTTTGTCCCATTGGGTTTTACTGGTAAGGTTTTTAATGAGGCATCCATAA
TGCATATTATTAGATATGTATGCTCTTTTTCCTTCACTAGATTTTTTTCCCACTGGGTTTTATCTACTAATGTTTTAACGAGGCACATAATCTAACGACA
TTCAAGAGGGAGTGTTATAAATAATTTGTATTATAGTGAAAGTCTAATTATGTGGAGTTTTAGGATATGGTTAGGAATATTATTTGGGGACCAAGTAAGG
TTTCGCTATAAATAAAGGATTTTCTTCAATGTAATAAAATTTGTAAAAGATATGAATCCTGAATTATAAATAAAAAACCTTTCTCTCCCCCTACTTTAT
>LE_HBa0047A14_SP6_8858 (trimmed for quality and cloning vector)
AAGATGTCATACACCTAATATTGAGTGTTGTCACTTGACAAAATCAATATGAAAATATCCAATGGGTTCGAAATCTAGCATATACAAGGTTTTGAAAAAC
TTGTTTATCATCCTCATAAGGATTAAATAGATTCAAAATGCATAAATCATGTACAAGTATTGTTATGCAAGTTGATAACTATAATTGAAACTCTTGAAGA
GTTTTCAAAAGGCAACAAATTATTTACTTAAAGAAGTTAAAGTAAGGAACTTAGAGAAATCTTTGACCCTGAAAGGAAGATTCATAAAAGGAGATAGAAG
AAAGCATATTTCGTCAAGATTTTTCTACACTCATGAGCTCCCAAAAATGATGATATCATGTTTGTTCAAATAATACTACATTGATTTATCCACCAAGTCT
CTACCAACTACAACTTTCAAGAAGTTGATACTCAAGATTGGAAAACGAAGATCCAAGTCTCTTGATGTTTTATGAGGGTGAGTTAATACGCGATGTACTC
TTTTTTCCTCACAAGGTTTTGTCCCATTGGGTTTTACTGGTAAGGTTTTTAATGAGGCATCCATAATGCATATTATTAGATATGTATGCTCTTTTTCCTT
CACTAGATTTTTTTCCCACTGGGTTTTATCTACTAATGTTTTAACGAGGCACATAATCTAACGACATTCAAGAGGGAGTGTTATAAATAATTTGTATTAT
AGTGAAAGTCTAATTATGTGGAGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.939416
Expected error %
0.0190252
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047A14
Clone
Clone name
hba-47a14
LE_HBa0047A14
P047A14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found