Clone Read LE_HBa0149I14_SP6_89882

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0149I14_SP6_89882
Primer
SP6
ID from Seq. Facility
LE_HBa_149_I14-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
19 trimmed for vector and quality, 763 raw
Sequence
>LE_HBa0149I14_SP6_89882 (raw untrimmed)
TTTAGGGGGAATGTTCTTTCTGTATATATGTAGGGCTTTGACAGACAAAAAGCGAAAAGACGTAGTAATTTTATCCCCTATAACCCAAATGGAGTCATGT
TGTATGCGAGTACGCGGCCACTTAGATAATGAAATCCATATTGATCACTCCCCACTTCCTAGTTTGAATGTTTTTCCCCGTATTTATTGTTCTTATTTTC
TGATGTTCTACCTAAACTTGCTGGCAACTGGGGCACTTACTAACTAAGTCTGATATATCCCTTTTTAAGTCATTCCAATAATAGACTGCAGGATGATCGC
GTGTACATCTTATTGACACCTGGAAGAATAGAAGAGCTAGACTTATAGGCATCAGCTGGAATATGTTGTAATCTNTTGTNTGATAATGAATAGATAATGT
ATGGTGGTATAGAATATATAATATGGTTAGTGGGAGAAAGATAGAGTAGATTGTTATGGATTGGTTATATGTGTTGATTATTATTGTAGTGCGATTTGCT
TTTTGGAGAGTAGATGAGAAAGGAAAGTCGTCTCAGCCCGCCCCCCCCCCTATTTTTTTTTTTTTTATTTTTCCCGNNCCCCCCCCCCCCCCGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTN
>LE_HBa0149I14_SP6_89882 (trimmed for quality and cloning vector)
CAAAAAGCGAAAAGACGTA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.912758
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0149I14
Clone
Clone name
hba-149i14
LE_HBa0149I14
P149I14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found