Clone Read LE_HBa0149N09_T7_90113

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0149N09_T7_90113
Primer
T7
ID from Seq. Facility
LE_HBa_149_N09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1557 raw
Sequence
>LE_HBa0149N09_T7_90113 (raw untrimmed)
GTTCTCATCCTGAGCACAGGTGGGNGTTAACTTATCCGAGAACTATCGAGATAATATGACGGGAGGGCATTGCNTACTGTCATGTATTCCTGACTACATC
GTCCATTGCTCATAGTCCTATGACCTCTATTTAGAGTGCAACANTCTTNATAGTCTATGAAGTGCATACGATCCCNGTTCCATGTTATCGCGTGTAACGN
CTCANTGATTCACATGAAGTACATGCTCACATGTNGCAACATACAATACTGCGTCNGGGCTCACGNTAGGTCTTTACGCTTGAGACNCNCCATAGCAGAT
ATGCCCTTCCTTCTGATATGTACCTAGAACTANCTAATTCATGTTNANGAGTACGTATTAACCACTAATTCTGCGTCTTCACTTGGTTCGATCTATATGC
TGTGTATGAGANGAGGATGCTCGACTCATTACTACATNCTCAGTACGCATGTGCGCATAACGCATCTGATAGTCCTACCATATGTAACGCGCAGCATCAT
CGTCTATTCCTCATGTCCCATACACACCTGCATTCAGCATTGATGCATGTAGACGTGTAGAGTCGAATACAACCGACTGTGTTTTGCCTCGCGCGTACTA
ATCTACGTTTGCCCTACAATACCTCTACTCTGCTTCGATAGAATCGTCTTGCTCTGCAACTAGGTTGCCCTTACGCGCATATTCTTTATTTAGGCACGTC
ACTGATTACTACTTNCATTTGCTCTATTGCCATAATGATAACTTAGCTGTACTGCTATCTGACACGAATGCACTCACTTAATATTAATGGTGACCTCCTA
ACTATAATGTCTCTCTAGCTGTCANGTGCAGATGACACCCAATCGTATATCGGCTTCTGCTATGTGTGAGTCTATTTCACTATCATACGTACCTCCAACT
GATGATCTCTTCTCATCTCATCAACATATGTTCGATCTAACGGAACACCTACATAACCGTTGGCTATCTTTACATACCGACTATAATCATGTATGTGGGC
TGCTTGCCCTGTTATTGACAGCTCAATATTATGATCTCAAATTATTGAATGTGATGAATGACACAGATAATTCATGTAAATGTACTATTTCCTTACATAT
AAACAAATAACTCACGTAACTGTCGTCTCTCCTCATTTCCTCCATCAACTCAAGACAAATGACTGTTGTTCTATATAATGCGCGTTTCAGTAAATTCTGT
GGTTTATTCTTCAGAATTACATTTTTCTCCTCTATCTTACTCTTTGTATTATTATAATTATATGTTTAGGGTTCGCACGCAAACTTGACTATAAATCCTA
TGCTACATGTGTATCAAACAATGTCTACCTTGCTAGAGTTAACTAGCGCATCACTAGATTCAAGTCGCTCTATGTTACTGATTTACTTTCAAGTTTCTGT
ATAACTTTCTATTCTTTTCTGTCGCGCTCTTTCTCGCTTGAGACACTTGTGGCATTTCTGCTTAACTCCCTTGTCTCATCTGGCGAGTCTATGCCTTTGT
GTTAGTCTCTTCTCTGTGATTATTATATCTTAAAAATGTAAAAGACTATACACATAT
>LE_HBa0149N09_T7_90113 (trimmed for quality and cloning vector)
TCG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.533729
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0149N09
Clone
Clone name
hba-149n9
LE_HBa0149N09
P149N09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found