Clone Read LE_HBa0149O24_SP6_90190

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0149O24_SP6_90190
Primer
SP6
ID from Seq. Facility
LE_HBa_149_O24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
483 trimmed for vector and quality, 752 raw
Sequence
>LE_HBa0149O24_SP6_90190 (raw untrimmed)
AATCGGTTCTTATCCCCACTTGGGTCAACTTTCCCATCTTCCTTCAGCAGCTGCACTACGCTGCCACCTACCGACCTTCACAAGCACGATGAACCGTCAC
AAGCACGACGGACCGCCACAAGCTCCGAAGGTGGTCTCTTCTGCATTTCTTTGCTTAAAATCCCCGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAA
GAGAAACTTATATAAAAATTAGCACAAAAATGCTTTTGGACACACTAAACTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCC
TCAAGTTAAATTCGTTGTTTTTCCTCAAGCAACGCACTATGACTCACTACACACTCTTTGTACAATAGTATCCATGTTTTATCCTTTGTAATCATTTGGC
TATCCATCCCGATTAATCTAATCAAATCTAAGCATGCTATCACTATTAGGCTTGAATTTTGTGGGATCAGAACATTATTTATACTCACCACGCACTAACA
CTTATCCTCTTCACTACCCCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTCATCCCCCCCCCCCCCCCCCGATNNTGNTTTTTCACAAATGATTTNAGTT
TGATATTATGATTATTTTGAATNTTAATTATTAAAGAGAGTTGAATCATTTATATTTTTAGCATTAATTTGCTCTATTTTAGTGTTTTAATTGATTAATA
AAACTTATGATGTTATGGATTTTTCTGTCAAAAATAAATTTTTCCTTTTTAT
>LE_HBa0149O24_SP6_90190 (trimmed for quality and cloning vector)
ACTTTCCCATCTTCCTTCAGCAGCTGCACTACGCTGCCACCTACCGACCTTCACAAGCACGATGAACCGTCACAAGCACGACGGACCGCCACAAGCTCCG
AAGGTGGTCTCTTCTGCATTTCTTTGCTTAAAATCCCCGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGAAACTTATATAAAAATTAGCACAA
AAATGCTTTTGGACACACTAAACTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCCTCAAGTTAAATTCGTTGTTTTTCCTCA
AGCAACGCACTATGACTCACTACACACTCTTTGTACAATAGTATCCATGTTTTATCCTTTGTAATCATTTGGCTATCCATCCCGATTAATCTAATCAAAT
CTAAGCATGCTATCACTATTAGGCTTGAATTTTGTGGGATCAGAACATTATTTATACTCACCACGCACTAACACTTATCCTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.960374
Expected error %
0.879454
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0149O24
Clone
Clone name
hba-149o24
LE_HBa0149O24
P149O24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found