Clone Read LE_HBa0047H17_SP6_9200

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047H17_SP6_9200
Primer
SP6
ID from Seq. Facility
LE_HBa_047_H17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
778 trimmed for vector and quality, 907 raw
Genbank Accession
Sequence
>LE_HBa0047H17_SP6_9200 (raw untrimmed)
AGTGTCATCCTCATGGACCGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCTGGCATAGAGTAGCTCTTATTTATGTTTAGTTTCTTAGATACTCT
TAGCTTTAGTACCTTGAGGATAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGAATAATAGTTGTTGAGTTTTTTTTTAGAAGTTTATTGAATTGA
TTTTCATTAATGAGTTTAAGTCTTCCGCATTGTATTTTTTCATTATGGTTAAAATGTTGGGGTTCAGAATGATTGGTTCGCTCACATAGTAAGATAAGTG
TGGGTGCCAGTCGCGGCCCGATTTGGGTCGTGACAATTTGTGATTCACATATATGAGTCCGGAAGGAGATTCTATAACATGGTACTATCATGAGATCGAA
AGAAGAGTAGTGTCATTGAAAATACCTACTATATCCATACTTGTTTAGCACAATTGAGCATCACTTATACCCCTATGTGATATCAATACCAATTCCCATA
CCTCTAGATTGTCTCTTACTTGTGAAATTCCTTTGATCTTGTTTAATTGCATATTTGATTACAGATATCTTTTTGTAAATTTAGTGGAATCATCCACCCA
ATCGTTCTAAAGTGCTGCAACAAACAGGTTTGCATACTTGAATTTTCTAGTTAAATTCTTGCCCTTAAATCATTCCTTGTGGAATTCGATTCCGACTTTT
ACTTTTGATATTTTTATCGACAACGATTACTTACTCTTTTAATCATTTTTAAAATAATTTGAGCATTATCAGTGACCCTATTACAAATCAAACATATACG
TCAAAAAATATGGTATTTGACAAAACGTCAACTTGATGGGTCAAAGAAATCTCCTTGCCAGACTCAATAGCTCTTGGGCAAAGTTACCAGATAAGTTCAA
TGAATAA
>LE_HBa0047H17_SP6_9200 (trimmed for quality and cloning vector)
CTTCTTCTTCATGTCTTGATGCCTTGAAGTTCTGGCATAGAGTAGCTCTTATTTATGTTTAGTTTCTTAGATACTCTTAGCTTTAGTACCTTGAGGATAG
ATGTTCTTGTGATGATGACTTCCAGATTTTGGGGAATAATAGTTGTTGAGTTTTTTTTTAGAAGTTTATTGAATTGATTTTCATTAATGAGTTTAAGTCT
TCCGCATTGTATTTTTTCATTATGGTTAAAATGTTGGGGTTCAGAATGATTGGTTCGCTCACATAGTAAGATAAGTGTGGGTGCCAGTCGCGGCCCGATT
TGGGTCGTGACAATTTGTGATTCACATATATGAGTCCGGAAGGAGATTCTATAACATGGTACTATCATGAGATCGAAAGAAGAGTAGTGTCATTGAAAAT
ACCTACTATATCCATACTTGTTTAGCACAATTGAGCATCACTTATACCCCTATGTGATATCAATACCAATTCCCATACCTCTAGATTGTCTCTTACTTGT
GAAATTCCTTTGATCTTGTTTAATTGCATATTTGATTACAGATATCTTTTTGTAAATTTAGTGGAATCATCCACCCAATCGTTCTAAAGTGCTGCAACAA
ACAGGTTTGCATACTTGAATTTTCTAGTTAAATTCTTGCCCTTAAATCATTCCTTGTGGAATTCGATTCCGACTTTTACTTTTGATATTTTTATCGACAA
CGATTACTTACTCTTTTAATCATTTTTAAAATAATTTGAGCATTATCAGTGACCCTATTACAAATCAAACATATACGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.945718
Expected error %
0.264443
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047H17
Clone
Clone name
hba-47h17
LE_HBa0047H17
C10HBa0047H17
P047H17
Clone type
BAC
Contamination
none
Estimated length
102,795
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found