Clone Read LE_HBa0029F16_SP6_92046

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029F16_SP6_92046
Primer
SP6
ID from Seq. Facility
LE_HBa_029_F16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
581 trimmed for vector and quality, 955 raw
Genbank Accession
Sequence
>LE_HBa0029F16_SP6_92046 (raw untrimmed)
CGGGGGATTTCTTTGGGTGGGTTGTTGAGTTTTAGTGACAGATGAATCACATGCCTAGAGAACGCTGACAGATCTGATTGCCTGAGTATATTTCGCTCTT
GCACACCAGTCCCATTCTCTCCAACATCTCGAAGTTGCTTCAAACTAAGTTCAAGTGAAGGCATGTCTTTACTGTCATAGGTGGCAATTTCTTTGATGTT
TGTGATCTTGGAAGGATCATTTGGAACTTCATTGGCAGTACTTTCTACTTGAGGCGTACATGTGTTGGTTATGTCACCCATATAACCAACATCCTTGTCC
TTCAGGTCATCTTCCCGTGTTTCCTTGTTCAGCTTTAGGTTTCTACCCATATTCTCATTATCTTTAGGATCTAACTCCAAATGTTTGTCCTTCATAGAAG
CTGCTAAACCATCCATAACTTTACCTGATAGGCCTTCGAGCTCTGGAACATTAGCAACGCCCATGTTCAAATCTTTAACCGTTCTAACATTTCCTGAGAT
GTAAACCACATCATAAAAATATAACAGATTATATAATAACACAATAACAAAAGTAAACAGAATAAAAAGAAATTGATCTAAGATGTTTTGTTATCCATGG
GGCGTGGAAGAGCCACCTACCCAGTTCATCCTTCTCATTGAGACATCTTCATGTGGATTTGCAGGCACCCAGGTAGCAATAAGTGTTTCTGGTCCTTGAA
TGGATAACCTGTGCTCAAATGCTATACAGGTGGATCTACCAATCCATATATGTTGACTTGGGATGATGGGATGTCCACATCTTGGCTCTTTAGAACACGA
CCCCTCTCAAAAAAGAATAGAAATATGATTTTATTGGAGCTCCAAGGGATGTCCTTAATAGATTCTAATATAAATAGAAGCAAAAAAAAAAAAATAATCA
CTTTATATTATTATTTTATCTAATGTTGTGGAATTGTAAAGTCTAATGGATGTTT
>LE_HBa0029F16_SP6_92046 (trimmed for quality and cloning vector)
TGAGTTTTAGTGACAGATGAATCACATGCCTAGAGAACGCTGACAGATCTGATTGCCTGAGTATATTTCGCTCTTGCACACCAGTCCCATTCTCTCCAAC
ATCTCGAAGTTGCTTCAAACTAAGTTCAAGTGAAGGCATGTCTTTACTGTCATAGGTGGCAATTTCTTTGATGTTTGTGATCTTGGAAGGATCATTTGGA
ACTTCATTGGCAGTACTTTCTACTTGAGGCGTACATGTGTTGGTTATGTCACCCATATAACCAACATCCTTGTCCTTCAGGTCATCTTCCCGTGTTTCCT
TGTTCAGCTTTAGGTTTCTACCCATATTCTCATTATCTTTAGGATCTAACTCCAAATGTTTGTCCTTCATAGAAGCTGCTAAACCATCCATAACTTTACC
TGATAGGCCTTCGAGCTCTGGAACATTAGCAACGCCCATGTTCAAATCTTTAACCGTTCTAACATTTCCTGAGATGTAAACCACATCATAAAAATATAAC
AGATTATATAATAACACAATAACAAAAGTAAACAGAATAAAAAGAAATTGATCTAAGATGTTTTGTTATCCATGGGGCGTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964847
Expected error %
0.174337
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029F16
Clone
Clone name
hba-29f16
LE_HBa0029F16
C04HBa0029F16
P029F16
Clone type
BAC
Contamination
none
Estimated length
99,065
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found