Clone Read LE_HBa0029F16_T7_92047

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029F16_T7_92047
Primer
T7
ID from Seq. Facility
LE_HBa_029_F16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1268 raw
Sequence
>LE_HBa0029F16_T7_92047 (raw untrimmed)
CATATTATATTACTATCCGCAATGAGCGGGTAGTGGCGTGCTGTCATATCAAAACAATTACTTTCCGGGGCCAGCGTACGCGCCGGACCATGATGCCCAC
GCCGTGGCTGGACAATCAGCGCCGCCCACACCCATCCACCACCCACCCCCCTTGCCCCGCGCGAGCCTAAGGGTNGTGCATTGGTGGGTGCGCCTCTTAC
TAATAAGAGAGCTAATGACTTCGTACGCTGCAGCGGTCACATGTCCTGACGACTCTGCGAGGTATTTCTGGCAGTNGCAGGGGTCACTCCCGCACGTCCC
TCCCGTCTTCTCCGGTAGTCATCAGTGGGTACGACG
GATTGCCTAGCGCACGCGGTATCTGTTTATTTATATCACCAATGTTAGTATGCCACCTCATCTT
TCTATAGCGCGCTTTTCTTGTCATATGGTGGCCCGCTCTTCTGCATTGTCTCGCGTGAGTATCTTCGCACCTACTACCACAGCATCACGTTCTATAATTG
AGTCGTTTGATTTTTAGTCTTGACTTCTACTGCTCTGGCGAAGCCCCTCGTCTTTGCCTTTCACTTGTCATGTACTCTGACTGAGTATGCTCTCTAGCCC
TCCCAGCACCGCGAATTGCTCAATCTATGTACAGAGACGACATGATGGTACAGACGAACTTATCAGTGAATTGCAGCAGATAATCTCTGCTCTTATTCTA
CGACGGCATGGTATTGGTGAATGAATGGTTGTGGGTGCATAGCCGGTCAGCCTCCGTGCTANACGCGGCAGACTCATATCTGTACGTGCTGGGTCGTCAC
GGCTCTTCCCACCTCACCTCGCCTCCACCCCCCCTCCTCCGCCGGGTCGACGCGTGTGCGACTGTGACCCGGCGCGCGAACTGTGTACACCTCAACTACA
GACCGGCGCTGGCGACGCTGCCTTTCTGACCGACTGATACGCCTGCGGTGCTGATATTCGTCTTTCAACTATAGCTCACTTCGCGACTTTTTCTCCTTTT
GCGGGAGAATCCTCCCACAGCGCGAGAGTTCGTCCCCGTAGATATGCCTGTGCTAACAGCTCCCTGATACACCCTGGATCTGGGCTTGCGGCTCTCATCG
CGCTCTTGAGGATTGTCCCGTCGTGTGTGTCTGCCGAGCGCTTGTCATCTGCCTTCAGTTATCGATATCGCGGGCGTGTGCTGGCAAAGAGGAGAGATGG
TGGCCTCTCTGCTACCATCGACGTTTACCGACACTCTCATATTATTGCGTTGGCCCGAACTCCGCCCT
>LE_HBa0029F16_T7_92047 (trimmed for quality and cloning vector)
GA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.82141
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029F16
Clone
Clone name
hba-29f16
LE_HBa0029F16
C04HBa0029F16
P029F16
Clone type
BAC
Contamination
none
Estimated length
99,065
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found