Clone Read LE_HBa0038A12_T7_92567

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0038A12_T7_92567
Primer
T7
ID from Seq. Facility
LE_HBa_038_A12-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
365 trimmed for vector and quality, 932 raw
Sequence
>LE_HBa0038A12_T7_92567 (raw untrimmed)
CGGGGGGGTGAAAGGGCGGGGGGGAACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTTAATAATTATTGTAACATCTACTTAATACTATAGCGATTG
TTAAGGTCATGTACAATGAAATATTGAGGGCATGTATGAATTTACATTGAAGCAATACCTAGAATTTTTTCCGAGCAAGAGAGATAGATAATGATGAATT
AATTATGTTGATTGATCTCGATTACTATGAGATGTTTCAAGTATAGGCTTAAGAAACAGTGTAAAATGTTTGATGTTGCAAGTTGGCTAGCAAGAAGAAA
AACTTTGTTCCGACTTAAATGCGTTATAGAGGTGAAGAGTATTAGTTTAATTATTATATTTTGGAGTAGTAAGGGCATATGAAAATTAGTCAACACAAGG
CAACCGCACCGCTACGTGCTGCGCCATGGATGAGAGAATTGCAGGGACACATTACAACCCGAGAGATCATAAGAAGCCTTATCGACGCTGTGGCACCTTG
ACATTCGCTCTGATATAGGCAGATTCCCCAGGGTCAATAGGGGGTCGGAGGAGGCTGAATTACCGGGAGCGCCGCAAAATTCTGTTAAAGAGGTGAGTTT
TGGCGCTCGCTTTTAAGGAAGGGCGTAGGTTTTCCACGAACGTCTGACTTCCACCTGCTCTTTCAACACTCGTCTCTGCCTAGGGGGCAGGGTCTTCTTT
AATTCTCTCCTTCTCCTGCGCACTAGGTGGCGGAACGATACGCTTGGTTTCGTGTAGAACCCAATGCACTCGGATCCTACGCTCGTCCGGCAGAGCGCAC
GCTTAGCTCGTCCGCTTGCATCCCCTGACGTTTGAGGTCCCGCACTACCCTCTCGCAAGACTTTCGTCTGTCCCTCTCACGACCTTTTCCGTTTCTCCCT
CTGTCCTCTCTCTACCTGCCCACTATCCCCCT
>LE_HBa0038A12_T7_92567 (trimmed for quality and cloning vector)
AGCTTTTTAATAATTATTGTAACATCTACTTAATACTATAGCGATTGTTAAGGTCATGTACAATGAAATATTGAGGGCATGTATGAATTTACATTGAAGC
AATACCTAGAATTTTTTCCGAGCAAGAGAGATAGATAATGATGAATTAATTATGTTGATTGATCTCGATTACTATGAGATGTTTCAAGTATAGGCTTAAG
AAACAGTGTAAAATGTTTGATGTTGCAAGTTGGCTAGCAAGAAGAAAAACTTTGTTCCGACTTAAATGCGTTATAGAGGTGAAGAGTATTAGTTTAATTA
TTATATTTTGGAGTAGTAAGGGCATATGAAAATTAGTCAACACAAGGCAACCGCACCGCTACGTG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.927337
Expected error %
3.98168
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0038A12
Clone
Clone name
hba-38a12
LE_HBa0038A12
P038A12
Clone type
BAC
Contamination
none
Estimated length
105,166
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found