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Clone Read LE_HBa0038C11_T7_92661

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0038C11_T7_92661
Primer
T7
ID from Seq. Facility
LE_HBa_038_C11-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1276 raw
Sequence
>LE_HBa0038C11_T7_92661 (raw untrimmed)
TCATAGATGTGCCACTGGAAGTCCCTCGCGCGGCGCGGTACCCTCACTGTCTGAGCTCGGGCCCCGCTCGAGGCNTGGGAATGCGTACGAGACAGTACAT
AAGAAGAATTGATGATCTCCCCCCTTTAAAAGGGGCCACCGCACTGGATCGACGAGGCAGAGAAAATGCGCTGAGAAGGGACCCCCTTTTAAAAAGAGGG
ATTNGAGTCGAGAAGAAGAAGAAAGATGAGATAGCCACCTCAGCCTTCACACTTTCGACGCCCTACTCCAAGGAGGAGCACGCTGTCTCGNGCAATGAGG
AGTATGGAATGTGAGGTAGCTAATTCTGAAGAATATCTGATGGCGTGTTGACGGGTGCCGGCCTGATCGCTGCACAGCCCACACAGCCCAGGGCCACGCA
GCCTCGATGATCGCGCAAACTCGTGTGGAGGTCACAGCGCGGTACGGTTCGGACTGGAGGAGATGTAGCCACTCGAGGGGTTGAGTCGATAACGATTTGT
GTGCTGTGGAGGTCGGGCATGGTGGGTGTATATTCGGGGGCGCGCGAGTAGATGGGTAGCGGGGGCGTTGATTGTATATGCGGGTGACAGCTGACACCGG
TTAGCGCTANTGAAATGTCACACGAGCATAATAGAAACGACCAATTAACCTCTGGTACTATCAAGAGAAGGACACGATACGAAGAGGCTAGTGTGAGGAA
TGGAAATATTGGGGAGTCGGCTCGGGTGGTGAGGGGAGGGGTAAAGGAGTTAGAGACAATGAAGGATGATGTGAGACGATAAACGACGAGATACTAGAGG
TGATCATAGATGGCAGGGAATGTGGGCGCGTGTGCGCGAGNCCGCAAGAGAGTGTGGGCTGCCGATGGATATGATGCAGGGAGAGACTACCGCCGTCTTA
TTGCTTACGCTCTCGGCTATGCTTATGATACGCGGGACCGAGCCTGTGTGGGGCTAAATGGGAGCGACGTGGAGCATTCGTCTTATAAGAGAGTCNTAGG
CGTGGCGTAGGCGGATTCGTGGCTCGAGCTGGTCCTGTGTGATGCGACCCACGGCACTCTAGAACTGTATAATCGAGTACGCGCGTTAGCTGCGAGTCTC
TCTGGCACTGCTCGCGCTTGTCTGAACTGCTTCGCATTGATGCCAGACGTTGTGCTGAGCGCAGCAGTGGACGCCTNATATGTATCTATGCCGTGTTATT
GGGAGGTGGATGTGCGAGCGCAGAACTGTGCTCTCTCTGTGGCTTGCGATTGAACCGCTGCATGAGAACGGTGAAC
>LE_HBa0038C11_T7_92661 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0038C11
Clone
Clone name
hba-38c11
LE_HBa0038C11
P038C11
Clone type
BAC
Contamination
none
Estimated length
113,168
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found