Clone Read LE_HBa0038M12_SP6_93142

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0038M12_SP6_93142
Primer
SP6
ID from Seq. Facility
LE_HBa_038_M12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
690 trimmed for vector and quality, 801 raw
Genbank Accession
Sequence
>LE_HBa0038M12_SP6_93142 (raw untrimmed)
CGCATTTCTCACACTTCATGTCAAGATCAATAGAATCATGTTTATGCCCAATATATTCTTTACTAGAACAATCCCAAAAGGGTTGNGGGCGGTTGTTTCT
CTNTTTTCTCNTTCCCCTAAAAAAGTCATTTCGCAACATATTTGCAGNAAAGCTGGGAATGTGGAACGAGTTGTTCAAGCAAAATTTATGACTTCTAAGC
TCTGGAATGAATGGAACAGCATGCCATTTGGAACCCAAGATATTGCTTTTCAAATTGGCTGAACATTGACAAGAAGGGACATGATAAACATTAATCGTCT
ATTTGATATTAACACAACATACCAGTATAATCCCACAAGTGAAATCTAGGGAGGGTAGAACGACCATATTGAATTTGTCCATTGAACAATTCTTTTGTCC
ACTTCTTCAGTTGCCTTGGATTTCTGCTAAGCAGTAAACTTCCCCTTTTCCAAATGAGTCTAATTACTCTGGCGCTCTACAACATTTCATGCACCAATTA
TCTGCCAAAACAGTCTTTCGCAAGGAAGTACTAAAGACAATTAAGACGATCCAGCCATATGCACAATGAAACCAACTTTTAGCCTGAGACGTGAAAGAGT
TAAAGAGAGACTGTAGATGGTAAAATGAACGATATATCACTCTTTGCTGAGAACTGTCGAACCAAGGCGGAATGCAGAAGGTAAAAATGAGCATAAAAAC
ATATTACAGGGCCAGAAGATATCAATTGTTGGTAGTGTTTCAATCATCAAGCAACTGATTTTTCTTAAAACCTGGGCAAACTAGAGTTTAACCAGACAAC
T
>LE_HBa0038M12_SP6_93142 (trimmed for quality and cloning vector)
AAGATCAATAGAATCATGTTTATGCCCAATATATTCTTTACTAGAACAATCCCAAAAGGGTTGNGGGCGGTTGTTTCTCTNTTTTCTCNTTCCCCTAAAA
AAGTCATTTCGCAACATATTTGCAGNAAAGCTGGGAATGTGGAACGAGTTGTTCAAGCAAAATTTATGACTTCTAAGCTCTGGAATGAATGGAACAGCAT
GCCATTTGGAACCCAAGATATTGCTTTTCAAATTGGCTGAACATTGACAAGAAGGGACATGATAAACATTAATCGTCTATTTGATATTAACACAACATAC
CAGTATAATCCCACAAGTGAAATCTAGGGAGGGTAGAACGACCATATTGAATTTGTCCATTGAACAATTCTTTTGTCCACTTCTTCAGTTGCCTTGGATT
TCTGCTAAGCAGTAAACTTCCCCTTTTCCAAATGAGTCTAATTACTCTGGCGCTCTACAACATTTCATGCACCAATTATCTGCCAAAACAGTCTTTCGCA
AGGAAGTACTAAAGACAATTAAGACGATCCAGCCATATGCACAATGAAACCAACTTTTAGCCTGAGACGTGAAAGAGTTAAAGAGAGACTGTAGATGGTA
AAATGAACGATATATCACTCTTTGCTGAGAACTGTCGAACCAAGGCGGAATGCAGAAGGTAAAAATGAGCATAAAAACATATTACAGGGC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.980994
Expected error %
1.87092
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0038M12
Clone
Clone name
hba-38m12
LE_HBa0038M12
P038M12
Clone type
BAC
Contamination
none
Estimated length
120,358
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found