Clone Read LE_HBa0043B12_SP6_93382

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0043B12_SP6_93382
Primer
SP6
ID from Seq. Facility
LE_HBa_043_B12-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
638 trimmed for vector and quality, 784 raw
Genbank Accession
DU054860
Sequence
>LE_HBa0043B12_SP6_93382 (raw untrimmed)
GGTTTTAAAGAAAGGAGGAACACTTTTTCTCTTCTTTTTCTTTTTTGGTTTTTGTTGTGTTTTTTCTTATGCTCACAAAATGGCATGCTTATATAGATAT
TTCAAGAGGAGGGGTTTCAAATAGAAGAGTTATTCTTTTTATTTTGAAAAATGGTTTGTCAAGATTAATGGTATTATAGGTCATTACTTCACCGATACAG
AAACCTCTTGTTCGTCTTTTGGAACGGATATGTTTTCTCTTTTGAAACGTATTATTGTTATATCATTGCATTAGACTTAATGAACATAGTTAGGATTAAC
TCAATGATAGTATTAACTCTACAATCCCACACCAACAAAGATAAAGAGTAACAATTGACTTTTGGGCAAAAGGAAGGAACGTGTACTAAAGTGTTATTAT
CTTTAAATTTGAATTGACACGTAACGATATGAGGCAACAACTTAATATACACAAAGTGAACTACTCTTGAACTGAGTATATATAAGTTGATACCCCATAT
TACATACTATGTGCTTAAATTTTAAGCAACCTCCGCGATACGAACAAAGTGCTTTTATGGTCATGCATACACACCTTGACTCTTATGAGTTCTCTAGAAA
GACGACCCATGTTTTTCATAAAAGGTGACAACACCTTTAAACTCACGTAGGTTATTCCATCCAGTCTATATCAAATACACCACCTTATGGGCATAGAATC
ATTAAGAGCAAGATAATCTCAACCCTATAAAACATTATCTCCACGCTATAGGGATAGAAAATGGGGGTGTAAATTGAGGGCCAA
>LE_HBa0043B12_SP6_93382 (trimmed for quality and cloning vector)
ACTTTTTCTCTTCTTTTTCTTTTTTGGTTTTTGTTGTGTTTTTTCTTATGCTCACAAAATGGCATGCTTATATAGATATTTCAAGAGGAGGGGTTTCAAA
TAGAAGAGTTATTCTTTTTATTTTGAAAAATGGTTTGTCAAGATTAATGGTATTATAGGTCATTACTTCACCGATACAGAAACCTCTTGTTCGTCTTTTG
GAACGGATATGTTTTCTCTTTTGAAACGTATTATTGTTATATCATTGCATTAGACTTAATGAACATAGTTAGGATTAACTCAATGATAGTATTAACTCTA
CAATCCCACACCAACAAAGATAAAGAGTAACAATTGACTTTTGGGCAAAAGGAAGGAACGTGTACTAAAGTGTTATTATCTTTAAATTTGAATTGACACG
TAACGATATGAGGCAACAACTTAATATACACAAAGTGAACTACTCTTGAACTGAGTATATATAAGTTGATACCCCATATTACATACTATGTGCTTAAATT
TTAAGCAACCTCCGCGATACGAACAAAGTGCTTTTATGGTCATGCATACACACCTTGACTCTTATGAGTTCTCTAGAAAGACGACCCATGTTTTTCATAA
AAGGTGACAACACCTTTAAACTCACGTAGGTTATTCCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.940635
Expected error %
0.0223099
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0043B12
Clone
Clone name
hba-43b12
LE_HBa0043B12
C10HBa0043B12
P043B12
Clone type
BAC
Contamination
none
Estimated length
107,897
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found