Clone Read LE_HBa0043B24_T7_93407

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0043B24_T7_93407
Primer
T7
ID from Seq. Facility
LE_HBa_043_B24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1233 raw
Sequence
>LE_HBa0043B24_T7_93407 (raw untrimmed)
CTTATCGGTTATATCATCGCTTAGAGTTGATCAATCGTCGCCGGGGGGTTATCCTCATTAGAAGTGCGTACTTTGCCAGGGTCAATGCTAATGCNTNATT
TGTAGCTATGGGGGTAAAATAGTAAGGAACCACTATTTTGGAGGGGAGGTAGNAGTGTGGTAGAGAAGTGGAATTAAGTCAGGTGGTTAATGGCGCCCTC
TTTAAAGAGTTGTATCTCGTTTATTAATGAAAGGGAAGAGATGTAACTATAACTCCCATAAATATGCACAGTAGATGTGTGTAGGAGCATATGCTATGAT
TGACACATAGTCTATACAGTTATACGTTGCAATATATTTCACTATTTTTGATTGGATTCTTTAGTTTATGTGATCTATGCATCACCAGAATATCGAGTTC
TGTAGCAGGTGGACACTCTCGACACGTCTGAAGCATACGGCTAGAAATGGCACTGAAACACATATTAATAGTTCTAACATCGCACACACAATAGTAGCCT
AATTATATGTACGAACTTGGCTGAAGTAGACAGAGAATCAATTCGTCGAGAGAGACTCATCATAATATTTTTAATATAACATAATCCATTTATCTCCTAC
AAACTCTTGGAATTGTTCATTTCATCTAATCAAGGGGACTTATCCATAATTCGTACTAATTTTACGCTATAGTTCCTCAAGAATGCTATCCATATAGAAC
CACNCAAATAAATAAAAGTAGATATCATAACATCGGTTATTGGTTTTATCGGATAACGTTGCTAGGGTATCATCCAATAGTCCAATTGACCAGGAATAGA
ATATCACAGACCACTGAAGCTTCTGTAACTAGAACTAGCTCTCACCCCCTGAGAAACTATTGAATAATGCCGTGGGAGGGTCTGGGGCTAAGGAATACTG
AAGGTGAAAAACCCTGGAAAAGATCAATATGTGCTATCTCCTTCCTGTCTGGCACTTATCTAATTAAAAAGGGTGAAAATACCAAAATGAACATATATCC
ACCAGAGTTAATGGCACTCATGCTCTCGGGGTGGGGACCAACCCATCGTAACACCTGAATGTTATGGGCAATGTAATCTCTGTTTCCAAACTCCTTAAAA
AATGGCGGACAATACCTAGATATGATGACCCAATAATCAACATATAAACAAACTTAACAAACAAAAGTCCACAGACGGTAACAAGAGTTAACACTATAAA
TATATAGGTGGCGTGTAAGAAAATGTCACAATC
>LE_HBa0043B24_T7_93407 (trimmed for quality and cloning vector)
TA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.04763
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0043B24
Clone
Clone name
hba-43b24
LE_HBa0043B24
P043B24
Clone type
BAC
Contamination
none
Estimated length
125,811
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found