Clone Read LE_HBa0043I09_T7_93713

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0043I09_T7_93713
Primer
T7
ID from Seq. Facility
LE_HBa_043_I09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1231 raw
Sequence
>LE_HBa0043I09_T7_93713 (raw untrimmed)
ATAGTGCAGACCTACTACACGTTAATAATTTATATCAATCCTATCGTGTATCTTCATCTTTTCGACTACAGGTGCTCTTGAGCGNCGCGTAGGTAATGAC
ATCTGCGCCTATCCCCTCCCTTTTAGAACACTAGACTGCCNACAGTATATGTAANTGACTACCAGTGCCGTGGCGGCCCCTCTAACAGAGCGACGCTCGA
GGTGCGATCTGACCTCGCCTCCCGCCTCTCCCAGTCGCATGTTTATTTTCTTAATAACATATACTCCATGGATTAGTATGCCTCTTATATTTTACCTCGC
TCCGCCTAATATCCTGCGATTTCAGGAGGTAAAAGTGCGTTGATATAGAATACAGAAGATTATATATTATGGACACGTACTACAATTGTATACCAAAGCT
AGTTTTTCCTTTCCAGCACATCACACTCGTTTAACTGAGTACCGAAGCTTTGTATATATATATACCATAAATAATCTTCATATGAAATTCCCTCTCTCAA
TTATAAATCTTTGGATGAACCCACGCATTACTCTCGGTCCCTCACTATTACCTCTTCTCGTCTCGCTCTTTATATTGCTACTCCTTGACTGGGTATTCTG
ACTAGGCCTTCCGCTTGTTCCGATCTCGCTACTTACCGTTTGCGTTTCAATTATCATAATGAGTCTGAAGCAATACTGGCTACTAGCGCATATGCTCGCG
ACCCTCCTCTCATGCTTGTGTCTCTTCTGTCATCCTATGATGTTCGAGCCTCCACACTGATCGACCTAGCCGCCTCCGTCTTTTTCCTACTGGTAATACA
CTCACTC
CACTGATCATGGCTTCTTTTAACGTCTTCTTCGCCTATCGTTTCGGCACCTACACATGTACGTACAAGCGTCTGTTCTCGATAGTCATTTTCT
TTCTCCACATTCTTTCACGACCTTTGTCATGTATTGTGGCGGCTTTCTTGATCCAACCACGTCTCTCATAATTTACTCAACTAGTACAAGCTAATTAAGA
TATTGGTTAGTACGAATGCTGGGCTCGGTCATGCGAGATGCGAATACAGGCACGGTACTTGGGCCAGGCATGGCATTGTAGTCATTCGCTGTTGGGAATT
TACCTTCCCCTATCGCATTCCTCCAATGATGACCTAGCTCCCTACCAGAATCCGCTGTACTGCCTCGTTGCAGTAGCTTTACATGACCAGTCAATGCGAT
TAGTCATTACTGGCAAGTCCTCTACCTCTCA
>LE_HBa0043I09_T7_93713 (trimmed for quality and cloning vector)
CA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
8.32163
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0043I09
Clone
Clone name
hba-43i9
LE_HBa0043I09
P043I09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found