Clone Read LE_HBa0043K11_T7_93813

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0043K11_T7_93813
Primer
T7
ID from Seq. Facility
LE_HBa_043_K11-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1151 raw
Sequence
>LE_HBa0043K11_T7_93813 (raw untrimmed)
ACATACATGCTACTACACCCGTGCGTCAACAATCGTAACACCAAAAGAATGACACTTCACTAGGGTAGCGGGCGGTGTGGTGTGCGTTATAATGTTGTGT
CTGCCGCTCCCCCCTTCTATATACGTTCCGTTTCCGTATATTTTGTATATGGTTTACTACTTCCTCTCTACTCTTCTGCAGCCTGCCTGTCTCTTGGGAA
TTGTTGGGCGCGAGTGCAGCCACGCATCACGGCTCCGGAGCTCTCGGCAGGTGTCTAATGGGACCTATAAGGCAACTCAGTAACAGCTCTCCAGGTCATC
TCTCCCCGGGGGACGAGGGTATCAGACATGTTGATTATATAAGATAATATTCTTTGCTTTGCTATGTCGGCTTCAGATATCTGTAGGGACCAGCAGAGCA
CTCGACGCATCTGGGCTTATAGCTACCATGCAACTCCGGCACCAGATGAATGGACACTTCACTCTTCTCCTCATTAATTCTCTTCACGATTGTATTTGTG
TGCCATCAGTTCCTTCTCCTCTTCTGCAGAATTTTTCTGTTGGGAGCTGGAGATCATGAGCGAGCTACGCGCTCCTCGCCGTCCCATAGACAAATTTCGT
CGTGCTCGTGCTCTTCGCCCTTGCTCTCCGCTTCGATAGTCACTATGAACTTAAGCCACTTAATGTAGGAAGTGCGGCCCACGATAGCATGCGGAGTTAT
AGATTTGTTGACTTGACTGCCTGTCGCGAACATGTGGTTGTGTCACAACCATTGA
TATGATGGATTAATATACTGGATATAATATGGAACCGAACATCTA
GAGCTCACCGGGCCACCAACAACACTCAACCTCACGTCCCTAAATCGTGTTTAGTTTTTTTACATGACCTGGATGCTGAGTAATATCGAGTATTTCTATA
TTTAGTTGCACGTCGCCGGATTGCTCTCTGTCCTCAACTCTTGGGTATCGCTATTAGCTACTTTGCATTTCTTCTTCTTTCTTTCCTTTTCCCTCTTTCT
CCTAGACCTCATCACTGTTATTCTTTACCTCACTTATTCTCGCCTTGACCACTCCTCGAGTGTTTACCGTCTCCGCTACGAACGTTCTGATCTACGCCGT
CTCTCTAATGCTCCGATCATTTTGCGGGTGGCTCTTGTATATTAGCATTCA
>LE_HBa0043K11_T7_93813 (trimmed for quality and cloning vector)
TAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.596482
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0043K11
Clone
Clone name
hba-43k11
LE_HBa0043K11
P043K11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found