Clone Read LE_HBa0046M03_T7_94661

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0046M03_T7_94661
Primer
T7
ID from Seq. Facility
LE_HBa_046_M03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 908 raw
Sequence
>LE_HBa0046M03_T7_94661 (raw untrimmed)
TCGGGGGGGCTGGAAGTAGTTCATCATATGTCCTTCGATTAATGTTTTACCTTATGCGATTATTCACACGACAACTCCTTAGAGGAGATCGTCTTTTATG
GNGAGATAAATCTCCATCTCTTTGTGAGCATCTTTATACTTTAATGAACAT
GACCTTCGTTTACGAGATATCTTCTGGCTTTTAAATCTAATCTCAAGAC
TATGGGTCAAACTATGCCTTGAAGGATACGAAGCGATTTGAAATTGCTGATGTCCTGTCTTTATCGCTTTCAACGATTAATTTAATTAGGATGTCCGTTA
GAGCGTATATGCCATCTTACTTTTAATTACGTTAATGAGCAAGTATCGGTCGATGTGATAATGATGTTCGAATACCCTAACCTCTTTTTATGAGTCTTGT
TTAAGCATTAAATTACTCCCTTTTTGCATGAGGAGTACTATATTTGCAAGACACGTCGACGAATTATCTACTTTATATCTTAGCTGCTACTTCTAACCTT
CTCGAAACAAAATGTGTCTTTGTACATTGCGATTACGTTCTTAAAGTTCGAATAAAGAAACTCGTTATATATTATGCGGAATTGTGGATTTCATCACACA
GTGTGCTAACTGATGGCTGCTGAAGAATACTACATATTAATAAACTGGTTCCTATTTACATGGTGCAGACACTATACTTATACTCTTATATCATAACGTG
CTCGATTTCAATTATATCTCTGCTATTAAATTGTGGTATGACTGCCATATGAATCATCATTATACCTATTCAGATCGCTTGTTTAATATTGTGGGCCATC
TCTCTATTTAATTGATGTTTGAATGTTGCTTGAACATTCTTGTATCTTTTTTGATTTTTTTTTCTCAATTCTAGGAGATGATGTCTTGTTAAAAAATGTT
TGCAAATC
>LE_HBa0046M03_T7_94661 (trimmed for quality and cloning vector)
GACCTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.252226
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0046M03
Clone
Clone name
hba-46m3
LE_HBa0046M03
C03HBa0046M03
P046M03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found