Clone Read LE_HBa0108N23_T7_96285

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0108N23_T7_96285
Primer
T7
ID from Seq. Facility
LE_HBa_108_N23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1811 raw
Sequence
>LE_HBa0108N23_T7_96285 (raw untrimmed)
ACAGGTGTCNTNTGTCNTATTACATATTAGATATAGACGGTGAGGCGAAGAGCACGTATGAGAATGATATAGGTGAGATGTAGAGAACATGNTATCGATG
GTGCTAGGTGGGCGTAGTGATCAGAGTGTGAGTGTGTGTGAGTCAGAGTTNAATGGTAGAGTCAAAAGTGAGAGTCCCCCCTCTCTATTACATAGNGAGT
AGAGTGTATNTGAANATACAATATAGTGAATATATGTGTNANGGATAGATAGTTTGTTGAGTGANATTCCTCCTCTCTTTATACGTGAAGAGANTAGNAT
GAGAAGATANGAGAAGTATAGNAGAAGTGATTAGAGATAAGAAGAATAGATTTAATGANATGAATAGTATAGTNAGATGATAGTATGCTCTGAGAGTGAA
GNTATATGAGTTGGATGATATATGTACTCTACTATCACTGTAGTNACGACTAATATGTGCGATGAATGGAGGCGTTAGGGATGAGGTATGGAACGNAAGA
GATAATGTGTAGTGGGNTAGTGAGGGCGAGTGAGCAGTGTGTTCAGATGANGNTGCATCTGATGTTAACATGTATATTGATCGAATGGTAATAGATGANG
AGTCGAAAGANATATTGAGACTAAAGTGATGTGTAATAGAATGCGATATTATAAGTANGACTGTGATATGATATAGATGGTGATTTGTTTGTAGTGNAAC
TATATATGTCGTGTGTGTGANATGATAATTGGTTATA
GATGATATGACTGCNGTTATTTGAATTGATGGAGTATATATAGTCGGNTAGTGGACTNCGACA
ATGCGACGTGGATGATCAGAAATACATTAGATGGTACGCGGCTTATATNGAGNGAGAATAGCGAATAGCGATGAATTGCAGGAGAGAGTGATATGTATGG
TATATCTTACGGAGTTGTGATAGGTGGAGATGAATGTTAGTGTGAAGATGCGCTGATTGAGAGNAGTAGGTGGGGATGAGATGCGACTANCGAGTAGANG
NGTAGAATAGTTGAATGGGTTGAGATGTGCAGNAGGTAGGAGCTGCCGATACGGCAGCGGCAGAGNCATAAGTGTGTTAGATATNGTACTATGTGNGCTG
TANGATTGGCATGGTAGAGAATAGATCGCGNATAGAATGATGAGACGTGATGTAGTGTNTATGCGTGATGGTTAGAACTACTATGTCGCATGTCTATATN
AGTTAGTGTACATGTNANTGTCACAAGCTAGTAATATTATATGTGTATATANTGATGATATATTAGATGCTATGTATGTAATATATATATAGTCGAGTAG
GTGTGCACGCTATATAGCTCTAGTAANGATAAGATGAGAAGATGGATAGAGAGGTAGAGAGAGCTGACTGTGACGATGTGTATTGCAGCTANGTAATGCG
ATTAGTAGAAATATACATAATANACGTAGATTAANTAGAATNGTAAGAGACATATGACGATGGATGTATATAGAGGGCGATGAGACGCATGATGAGCGAT
ATGATCGTATGAAAGCGTAGACANAGTATGACAACTTTAGTACATAGTAGGAGTATCTGTATATATGATAGTTGACGATCATATATAACTATGTGATACA
TTAGGATTAATGAGAGATATTNATAGCTGCTGTAGTGACGANTTAGATGATAGCATATATACTTAAGATATTATAGTGNATTGAGATGATATGANGAATT
AGATGATACTGATACATCCGCTTACACGTATAGACAGTATAATNGAGTAGACANNTANGATATAGTATACTGTATGAGAGATGACGAGATATGAATAATA
ATACATGAGAG
>LE_HBa0108N23_T7_96285 (trimmed for quality and cloning vector)
GA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.47027
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0108N23
Clone
Clone name
hba-108n23
LE_HBa0108N23
C03HBa0108N23
P108N23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found