Clone Read LE_HBa0132B08_SP6_98750

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0132B08_SP6_98750
Primer
SP6
ID from Seq. Facility
LE_HBa_132_B08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1465 raw
Sequence
>LE_HBa0132B08_SP6_98750 (raw untrimmed)
TCGGGCTCACCAACTGCTGCGACGAGTCCNCTCATACACCATAAGCAGACGACATTCACATCGTGGCTCTGTGCTACCGGCAGAGCGTAACCCCACACGA
GGAGAAGGTATGCGCAAGAAGTCGAACCAAGGTTATGATTGATAAGAGCAGATGATGAGCAAGGTTGGTTCCTCGCCCACGCACCAAAGCATTCCACCAC
CTATACGTCCGCGAAGTAGATGGTTAGTGTGTATGGATGTTGAGTCGTTCTTCTCCTCATCTACTGTATGCCATGGAGGCTTCAACTGATTCGACATGGG
CATCTTGGACCCACAAACAACCCCGCCGCAAAAATAACGAATGGTGGATACTGCCCTACTCGCACATCCTTCCATCAAACTCATTGTGCGTTTNTATCGA
CTATCGCGCCCCTACCTCACGTCTCTACACTGTATNACGTGTGTTGGAGGTGTAGTTATGTACTCATGCTTGNGTAGTGTTCTCTCGATGATTGCTGACT
CGGAGATCCGTTGCCGGACTAGCCCCTCTCACGCACAGGTGCCACCACCTCCCGTGCGGGATAGTCNACAACGTGTGAATTTTNGCTTCGCTCCGAATCT
TCTGGCTGCCGTGCATCCTCCTCTGGCTGTATGGCGACTCTCCAGGCTGAGTAGCGCGATCGTGGGCCACTGCCGCGAGGGTGGTATGCCACCTCTATGG
AGTAGGCGTGATGTGGTACGGACGCGCTACACTGCCATAGTGATAGCTGATGAGTTGTCTTGTAATAGGCGGATGATATGCTCGACAGTGTGATGGTAAT
ATAACATTTATATGTTCGTACGACGCCCACCTATGCTGACAATANCCGTACAGTGCGGTCCACGCTACACTAGTTGACGACACAATGGTCTATATGACAA
CAGATTTGCGATCATTGATAGAGTGATAGTGGGACAGATGCAGACTGAATGACGGACGAGTGTAGTCACAACAGATACAGGCGGAGCGCGACGCGGACTG
CTGACACAATGCACTGTCANCCTACAATAGTCTCCATCGTGTGTGTCGTGCTTGTGTGCTTCTAACTAGTCGAGGATAGGGTATCGTATCGCGGATGTGT
TGAGTACGTAATATCGTCATGTGAATGCTGGTACGCTGTTAGTGGGCTGGAGCGCGGCCACGCGCGGAGCTGGCACACGCAGAGACCAGTAGGGTATTAC
AGATGTATGGACTACGTGGAGGTGCGTAACGTAGCACGGACAANAGGTCCAAGGAACTGAAGCGAGCTCACTCGCCTTACCGGNNTGNGGNTNNTNGTGT
GTGTGTTTATGTTTGTNGTGTGNTTGGTGTGTGGGTGTGTGTGTTGTTGGTGTGGTTGATGTGGTGTNGTGNTTGTTGTTGTGNTNTGGTNGGTGTGTTG
TGTTGTGTGTGGTGGTGTTGNGTGTTTGGTTGGTTGTGTGTGTGTTGTGTTTTCCC
CCCGNTNGN
>LE_HBa0132B08_SP6_98750 (trimmed for quality and cloning vector)
CC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.24113
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0132B08
Clone
Clone name
hba-132b8
LE_HBa0132B08
C12HBa0132B08
P132B08
Clone type
BAC
Contamination
none
Estimated length
62,172
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found