Clone Read LE_HBa0132L21_T7_99257

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0132L21_T7_99257
Primer
T7
ID from Seq. Facility
LE_HBa_132_L21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
10 trimmed for vector and quality, 813 raw
Sequence
>LE_HBa0132L21_T7_99257 (raw untrimmed)
CCCATGAATTTGGCGGAACAGCGTTCTCTTTTTCTATTCTGCAATTACTTTCATGCAACACAAAATGCAATTGCTACTCGCTAAATAGCCTTTTTCTAGG
GAGAGATAAATTCTCTAACCAGGACAACTCTAATACAACATAAACCAAAGGAAGAGTTATGAGTGTGTATATACATATATGAAATCACAGGAGAAAGGAC
AGTCCCTCATCTCTCCTGGGACGTTTGAGTCTGTCCAGCTCTTTCTCACTCACTATCCGACAAAACTAAGTCCATTGACTCCCCTGCTCGCGTAGCGTCG
CAAGGCAAATAAAATTTTATTTTTCC
CCCCCCCCCCCCCTCCCACTTCCTTACAAAAAAAAAAAAAAAGGATCGGTCTGGGTGTGTTAATTCTACTTTTT
TCTATCTCCCCCCCCACCCCGTTTGTGTGATCTCTATAAAAAAAAAAAAGAGACCTCTCTCCGCCCAACCAAAAGATTCTCAAGTTCTTTAATCTATATG
GCAAAACTAATTACATTCGGGATCTTTCGTGCGCTAACTATATAAATCTTTGTTTACTATAATTTTGTAGACTAGCTCCGACTCTATCTCATCCTTCTTA
AACGCATAAACCTCTCACACTCTACTAATGTTTGTATGAGTTCTTTCTGTTCGTAGCATTTGTCTTTTTCCTTAGCTCTACTCCTCTTATACGATTGTAA
TCACCAGCGCAGCGGTCTCTGGTTGTTGGCCAACTATTTTTTATATTTTCTAAGATGTAACTACACGATTCAAATTATTTACATATCTAAATCTTCTTTC
AACTAACATTCTN
>LE_HBa0132L21_T7_99257 (trimmed for quality and cloning vector)
CCCCCCCCCC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.192707
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0132L21
Clone
Clone name
hba-132l21
LE_HBa0132L21
P132L21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found