Clone Read LE_HBa0141F08_SP6_99710

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0141F08_SP6_99710
Primer
SP6
ID from Seq. Facility
LE_HBa_141_F08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 929 raw
Sequence
>LE_HBa0141F08_SP6_99710 (raw untrimmed)
AAACCTTGGTCTGGGGAAAAAAGCGACTGGTAAGTCAGTGATACCTTTCATCTTAAAAAAGGTACATGGTTCATTAAGGGGCCCCACANCCCGNCNACNN
NACCNCCNNCTTCATAAAAGGGCTGNGANNAGNNAAAANAANAAAANAAAAAAAAGAAGGAAAANAANNAAAAGGAAAAGAANAAGAAAAAAAGAGNAAG
GANGGAGAAGGAGGAGAAGAAANGGNAGAAAAAGAANNAGAGGAAGAAANAAGGAAGGAAGAAGAAAGGAGAAAANAAGGGGGAAAANAAAAANAAAAAA
GAAAAGAAAAGAGAAAAAGAAGNNGAGAAGAAGGAAGGGGAAAAGAAGAAAAGAGAAGANAAAAAAGAAGGAAGAAGGAGAGGGNNGAANGAGAAAGGGG
GAGGNAANAGAGAAAANGAAGGAGAGAAGAAGAGGANANAANGGAGGGAAGNGGGGAGGGAANGAAAGGAAAGAAGAAAAGANGN
AAAAGAAGGAAAAGA
GAAAAGAAGAGGAAAAAGGAAGGAAGAGGAGAGAGGNANAGGGGGGAANGGAGGAAAGANGAGGNGGGAANAGGAGGGAAGAGAAAGGAAGAGGGGAAAA
AGGAAAAGGAAGGAGAANGGAAAGAAAGNAGAGGAAAAAAGAAAGAGGGAGGAAGGAAANAAGAAGAAGAAGAAAAAAAAAAAAGGAGAAAGAAAAAGGA
GAAGGAGGGGANGGAAAAAAGAGGAAAGGAAGAGGGAAGGAAGAGGAGAAGAAAGAAAAAAGAAGAAGAGAAAAGAGGAAAAAGGAAAGGGGAGGAAAGA
GAGAAGAGAAAAAAAAAAAGAGAAAAGAAAAAAAGAAAANGAAAAGAGAGAAAGAGAAAAAAAGAAAAGAAAANAGAGGGAAAAGAGAGAAAGNGGGGGG
GGAAGGGGAGAGGGGGAGAAGGAAAAGGG
>LE_HBa0141F08_SP6_99710 (trimmed for quality and cloning vector)
AAAAGAAG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
6.45007
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0141F08
Clone
Clone name
hba-141f8
LE_HBa0141F08
C02HBa0141F08
P141F08
Clone type
BAC
Contamination
none
Estimated length
125,397
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found