Clone Read LE_HBa0141K03_T7_99941

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0141K03_T7_99941
Primer
T7
ID from Seq. Facility
LE_HBa_141_K03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1234 raw
Sequence
>LE_HBa0141K03_T7_99941 (raw untrimmed)
ATCATCATCGCTACGAATTATCGCATGCTGCGACACAGATAAGAGAGAGNAGCCGTCTCTCTCACTCTAGAGACACNAGCANTGTAGATCGCGAGTCTCA
ACNCATGTCGCAATTGCATTCGGAGACAGCGCATGTTAGCGCCTAACACATTATAGATAGGACACACANAAGTGACATGCAAACCAGCATAGGAAAGGAG
CAGAGAGGCTGATNATAGGACACATGACAGTTACTTAAGATGGACTGCAGACGGCACACAAGCTACTCGACCACGACGGATGACCCACGGCTGCNCGAGG
CGGTTTGTCGCTGCACNTGTATGATGCCTCGCTTGACCTTGTCCGCCTCTCACACTCACCTTGATGTACATCCTGCTTATCTGATCGATATANCATCTGT
GCTCTGCTGACACGACGACAATGCACACTCCCACTCCCTTCTCGTAACTTGAATATCACCATACGNGCTTCACATAATCGCCATTTGTCTACTATGTCAC
TGTATCATGACTTGTTGTNATAGATGTANTGCGGTGCATGCGGGAATGCGGGGGTATCGGATGTATGCGCGTAAGAGATATGANGCTGCCGGGTACGTGA
GACCGCGTGTGTGAGTGAGTTTTGAGCACTATGATGTGATGGTTGTGNGGTGNCTNCGGTGNAGTATATGGCGTGTTGANGTCGGTGAGTATGATGGATT
ATGAGAGCTGTGCTGTTGTTNATCTGACGACGNGCTGCATACACTAGCGCTCGTCGCAACACTCACTCTCTTCACTCACCTCCACGACGTACACCTACTG
TCTGCTGAGCGCGCTGTGGATGAGAGACGCTGCGCTTATCGTGACGGTCATGNATGCTATGAGACGCACTATACTTNTGTAACCGATATATCACGTCATC
AGCACGACNATTATACATATGTCTGGCGTGTCTGCATGTCTGTCAGGNTACACATGGTATNCNNTGTACTATAACAAGGGAGCATCNCNCTCTCATCTGC
CCTGGCGATGTCGCGACGTGGNCGCCATGTGTGTATGCNCTGGGTATGATGTCGCGGCACATNTGTTGTGAGTAGATTGCGATGTAGTCGCTCTCCTTGC
GAGATTACTGCTATACTACTACTAACGCACTCACGGTACTCACACCTCTCNGACTCGCGGACNACGCTACTCACAACGCTTCTCTCCTCGTGTTGCNCGT
CGTGTGCTCTAGAGCATCATGCTCNCATCTCTCT
>LE_HBa0141K03_T7_99941 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0141K03
Clone
Clone name
hba-141k3
LE_HBa0141K03
P141K03
Clone type
BAC
Contamination
none
Estimated length
87,479
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found