SGN Marker SSR488
SGN-M1161
| Synonyms |
| Locus associations |
| SSR info |
Annealing temperatures: Low: 50 High: 53
Repeat motif: ACA Repeat number: 7
Repeat motif: Repeat number:
Forward primer: CCGATGGTCCACTTGAAAC
Reverse primer: CGGAAGAAGAATCCTGAGCA
Predicted size: 242
| Derivations |
This marker was derived from EST read SGN-E15514
| Mapped locations |
| Other PCR data |
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| Overgo hybridization and physical mapping |
SSR488 was used as an overgo probe on plate 9 [well F4]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
GAGAATCAGAGGAAGCAGAGGATG
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B sequence
GGTGTTTCCGACAAACCATCCTCT
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AB sequence
GAGAATCAGAGGAAGCAGAGGATGGTTTGT
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Marker sequence
TGCCCGATGGTCCACTTGAAACNCNACCCCATCGTTTTTTTTTTTTTTTT
TTTACCAAATCAATCAGGTTGATAATAATTGTCATTCAAGAGAAAATTAC TTGTTCTAATGAACTGAAGATAATAAGCACACAACAACAACAACAACAAC AACTTAGCAACAGAAAAACACACTTATACATGAACATTACACCGCTATTT AATCTTAGAAAAAAACCTGAAACTATGCTCAGGATTCTTCTTCCGCGGGG CATTCTCACTGAATCAGACTCGATAAAAATGGATTATCGCGCTTTCCCTG ACTTGTCTTTTCCCATTTCCATCTTCAAATATAGTACTTGTTCCTGTCAG GTTATAATGGGAGATTGTGTTTCCGAGCTGATTCAATGACGAGAATCAGA GGAAGCAGAGGATGGTTTGTCGGAAACACCATCATGCTCCTACTGTATTT CACCTTGGATTCGTGTAGGAATGCGAAAGCCAGAGAATCCGCCTAAATTG TGAGGCGAATCCCATGCCAGAAAGTGATGTTGGAAACATAAGAAACACAA CTTTGATGATAGTTTGGGTTTTGGGGATTGGATCACACTGGGCGAATGCA AACCCTGTTGGTCTATTCCTGCCGAAACGAGGTGAGTACTGGGCTGAGGG GCCCCTTTTGACAAAACTGGTTTGGGGACCATGTGTATACGCGGGGAGGT GGGGAAAAAAAACTTCTGTCAAAATTGCCCCCACAGGTTCCAGGGGCGCG GGCCAATAACGGTGTGTGGGTGGGCCCTGAGCTAACCGAGAATTTGGGTA ACGGCTGGGTTGAAAGAAAAGGTAAATGGTTGAAAAATGGTTAAAGGAGA CCCTTACCCCCCCGAAAGAGGGAAACCCTCCGGGCCATATTTNTTCTTTT |
 Genomic location of SSR488
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Genomic location of SSR488| User comments |
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