SGN Marker TG167
SGN-M122
Synonyms |
Locus associations |
RFLP details |
Insert size
1400
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG167 image not available
|
Forward sequence
AAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGATCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACT
CTCCGCTAATCAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTGGTAAGTTTTGGTTTCTTTCTTGATTTTCAAGG CATGTTTGTCTTTGATTGCAATCTTAATGTGATTGCTTCTTGATTTTTAGGTTTTAGGCATCCCATGGGACGTGGATACAGAAGGTCTAA GGGAATATATGATCAAATATGGAGATTTAGAGGATTGTATTGTGATGAAGGTCAGTCTACGCAGCTACCTTGACTTTTATGATATGCATT GTTTCAGATATACTGTAGTTCCAAAGACTTTCATGACCTAACTGTGTGCAGTCTTGTTTTTTGTGTTGACAATGTTGTTTCTTTTTTTGT TTGTTAATTGTGCTTGTATCAGAAAA |
Reverse sequence
AAAATTAAAAAAAACAGACCATAAAATAAGAACAGAGGAATCACTAACAGAGTAATAGGAAGCTGGGCACATTGACCTACTAAAAAAAAG
AAGAGAAGAAGATGAAGAAGCAAAAAAAAGAGCAGCTGACTATGGCAGAAGAGAAGCTGCAAAGCAGAGGAGAAAGAAGAAGAAGACGTA ACTAAAGGCTGAAGCTGAGGAGAAGAGAGTCACGTGTCAAAGAGAAAATTGAAGAAGAGAGTCGTGAGTCACGTTTGTTTTTAAAAACAC TAATATTGCCATTTAATTATTAAGCACGTTTGTTTTTTTTCAAAAAGAATAAAATAAAAGGGCAACAATGGTGCCACCTCACCACTCATC ATTTCTCGCCATTGATCGCCTTTGCAGGGTTGCGCCTTACGAGTAATAGGCGCAAAATCTCTGGCCAAAGGCAATCGCATTTGATAATCT GGTTTACTTTACCAGGAAAGAACCCAACGCAATCTTGAATC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U164888 | 1.4e-10 | 33 (6.9% of RFLP seq) | + |
SGN-U164888 | 2.4e-52 | 151 (31.7% of RFLP seq) | + |
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| ![]() Tomato QTL map |
| ![]() Potato meta-QTL consensus map |
| ![]() Sun1642 x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
TG167 was used as an overgo probe on plate 6 [well C2]
Plausible BAC Matches: P316K19, P266G08, P104A12
Overgo Sequences
A sequence
ATAGAGAGAGGTGTGGTGAGATCG
|
B sequence
ACTCAACTCGCTCTCGCGATCTCA
|
AB sequence
ATAGAGAGAGGTGTGGTGAGATCGCGAGAG
|
Marker sequence
AAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGA
TCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACTCTCCGCTAAT CAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTGGT AAGTTTTGGTTTCTTTCTTGATTTTCAAGGCATGTTTGTCTTTGATTGCA ATCTTAATGTGATTGCTTCTTGATTTTTAGGTTTTAGGCATCCCATGGGA CGTGGATACAGAAGGTCTAAGGGAATATATGATCAAATATGGAGATTTAG AGGATTGTATTGTGATGAAGGTCAGTCTACGCAGCTACCTTGACTTTTAT GATATGCATTGTTTCAGATATACTGTAGTTCCAAAGACTTTCATGACCTA ACTGTGTGCAGTCTTGTTTTTTGTGTTGACAATGTTGTTTCTTTTTTTGT TTGTTAATTGTGCTTGTATCAGAAAA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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