SGN Marker T0214
SGN-M1383
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 1.05
Tomato EST read: TSHAK67TH
Arabidopsis best BAC match: AL353994.1
Arabidopsis position: 5.0159000
Arabidopsis identities: 0.876
Best GenBank protein hit: AAC41647.1
Evalue: 3.9e-95
Identities: 0.852
Description: glyoxysomal malate dehydrogenase [Cucumis sativus]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TSHAK67TH
Arabidopsis best BAC match: AL353994.1
Arabidopsis position: 5.0159000
Arabidopsis identities: 0.876
Best GenBank protein hit: AAC41647.1
Evalue: 3.9e-95
Identities: 0.852
Description: glyoxysomal malate dehydrogenase [Cucumis sativus]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0214 was used as an overgo probe on plate 9 [well C2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
ATCAGGAAGATGCAGCCATCAGGT
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B sequence
GTTGGTGAACTTCTGCACCTGATG
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AB sequence
ATCAGGAAGATGCAGCCATCAGGTGCAGAA
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Marker sequence
TTCGGCACGAGCTCTCATTCCAAAGAATCAGGAAGATGCAGCCATCAGGT
GCAGAAGTTCACCAACGAATAGCCAGAATTTCAGCTCATCTTTACCCTTC AAATCCCCAGATGGGAGATGGGTCTATTTTGGAAAGAACAAATTGCAGAG CAAAAGGTGGAGCAGCTGGATTCAAAGTTGCTATACTGGGTGCTGCTGGA GGAATTGGGCAGCCACTTGCAATGTTGATGAAGATGAATCCTTTAGTCTC AGTTCTTCATCTCTATGATGTTGTTAATGCTCCTGGTGTTACTGCTGATA TTAGCCACATGGACACTGGTGCTGTTGTGAGGGGTTTTCTAGGGCAAAGT GAGCTTGAAGGTGCACTTACAGGAATGGACCTTGTGATCATACCTGCTGG TATTTCAGGAAAACCTGAAATGACAAGAGATGATCTTTTTAAGATTAATG CTGGAATTGTGAGGACCCTCTGTGAAGGAATTGCAAAGTGCTGTCCTAAT GCTATTGTCAATTTGATTAGTAATCCAGTGAACTCCACAGTTCCTATTGC AGCTGAAGTTTTCAAGATAGCATGCACTTATGATCCAAAGAAGCTTCTTG GAGTTACCTCACTTGATGTTGTGAGAGCTAACACTTTTGTGGCATAAGTC TTGGGACTAGATCCT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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