SGN Marker T0659
SGN-M1528
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 2.11.01
Tomato EST read: TMEAE73TH
Arabidopsis best BAC match: AC005275.1
Arabidopsis position: 4.0190000
Arabidopsis identities: 0.886
Best GenBank protein hit: CAA46808.1
Evalue: 5.2e-77
Identities: 0.878
Description: Rieske FeS [Nicotiana tabacum]
Comment: Chloroplast PSI reaction center complex
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAE73TH
Arabidopsis best BAC match: AC005275.1
Arabidopsis position: 4.0190000
Arabidopsis identities: 0.886
Best GenBank protein hit: CAA46808.1
Evalue: 5.2e-77
Identities: 0.878
Description: Rieske FeS [Nicotiana tabacum]
Comment: Chloroplast PSI reaction center complex
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
T0659 was used as an overgo probe on plate 3 [well C12]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TGGGTGCACTTGCTTTACCAACTG
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B sequence
GGTACAAGCATTCCACCAGTTGGT
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AB sequence
TGGGTGCACTTGCTTTACCAACTGGTGGAA
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Marker sequence
GCTTCTTCCACTCTTTCTCATGTAACTCCTTCTCAGCTATGCTCAAGCAA
AAGTGGTATTTCATCGGTTTCACAAGCCTTGCTTGTGAAGCCGATGAAGA TTAATGGTCATGGAATGGGAAAGGATAATAAGAGGATGAAAGTGAAATGT ATGGCAGCTAGTATTCCAGCAGATGATAGAGTGCCTGATATGGAGAAAAG GAATCTTATGAATTTGCTTTTATTGGGTGCACTTGCTTTACCAACTGGTG GAATGCTTGTACCTTATGCTACTTTCTTTGCACCTCCTGGCTCAGGAGGT GGTAGTGGTGGTACCCCTGCCAAAGATGCTAATGGCAATGATGTTGTTGT GACTGAATGGCTCAAAACTCATGCACCTGGAACTCGAACCCTCACACAAG GACTAAAGGGAGATCCTACTTACCTTGTTGTGGAGAACGATGGAACACTC GCGACCTATGGTATCAATGCTGTGTGCACTCACCTTGGTTGTGTCGCGCC GTGGAATACTGCTGAGAACAAGTTCATTTGCCCTTGCCATGGATCTCAAT ACAACAATCAAGGGAAAAGTTGTTAGAGGACCTGCTCCTTTATCCTTGGC ATTGGCTCATGCAGACGTTGATGATGGGAAA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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