SGN Marker T0703
SGN-M1551
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TMECZ14TH
Arabidopsis best BAC match: AC006569.4
Arabidopsis position: 2.1170000
Arabidopsis identities: 0.730
Best GenBank protein hit: AAD21749.1
Evalue: 4.7e-24
Identities: 0.487
Description: hypothetical protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMECZ14TH
Arabidopsis best BAC match: AC006569.4
Arabidopsis position: 2.1170000
Arabidopsis identities: 0.730
Best GenBank protein hit: AAD21749.1
Evalue: 4.7e-24
Identities: 0.487
Description: hypothetical protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPEN 2000 |
| ![]() Eggplant-LXM 2002 |
Overgo hybridization and physical mapping |
T0703 was used as an overgo probe on plate 7 [well H2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GAGGTCCTTGGTACAATGCATCAC
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B sequence
TGGTGAGCTACTGCTAGTGATGCA
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AB sequence
GAGGTCCTTGGTACAATGCATCACTAGCAG
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Marker sequence
CTCACATAAGCAAAATGTTGGGGAGAAGATTTATCTCCTTCTTGCGTCGC
TCTCCATCAGCTTCGGGAAAAGTGGTGGCCGAGGAAGGGAAGGCAAAGAC ATGGGGGCGAAGGATAGTGTCAGGGACCTTGATTTGCTTAACTGGAGGCG TTGCTCTAAGTGCTCTTGATGATCTCTCCATATATCATAGCTGCAGCAGC AAGGCCTTGGAAAGAGCCAGTAAGAACAAGCCGATTATAGATGCCATTGG CGAGCCCATTGTTAGAGGTCCTTGGTACAATGCATCACTAGCAGTAGCTC ACCAAAGGCAATCTGTATCATGTACATTTCCTGTCTCTGGACCCCAAGGC ACCGGAATTTTTCAGCTGAAGGCAGTTCGTAATGGAGAGGACAAATGGTC ATCATTTTTACGGGCAAGCGACTGGGAGATACTCATTATGGAAGCTCTCG TCCATGTTCCCGGGGAATG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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