SGN Marker CD34
SGN-M161
Synonyms |
Locus associations |
RFLP details |
Insert size
600
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
CD34 image not available
|
Forward sequence
not available
|
Reverse sequence
GTCAGAAAAACCAAATAGAAAAAACAACCTCTCAGAAACAGATTAAGATCAATATCCTCCCTTCAAATCATTAACCACATCATATGGTAT
GGGGGTAACTGTCTCCAGAGTAGCACCTTCAACCATGAACCCTGGTTTGGGTCCTAGTGGTTGCCTTTTTGTGCTGATGACTTCTCCTCT AGCCTTGGCGTCAGCCTTAAGTTGGTCATTCTTCTTGATCCTTTCCCTGACTTCTTCGGTGCATCGAGATTGCTGGACATGCTCAATCCT CACATGGATCCTCTTTCTTAAGATCTTGTTACGAACCTGCTTGTTGACTTCAACACCAACGGCGCGTTTGGTAACATTCCAAACACGACC AGTACGTCCATGGTAGAACTTGTGAGGCATTCCCTTGTGAATAGCACCATTCACCTTGATATCAACATAATCTCCGATTTTGAAAATCCT CAAGTAGGTCGAAAGTGCGATGGTACCCTTCTTCCTGAAGGCGCGAGAGAATGAATCTCTCG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U160776 | 6e-115 | 208 (40.6% of RFLP seq) | - |
SGN-U143800 | 6e-118 | 477 (93.2% of RFLP seq) | - |
SGN-U143799 | 511 (99.8% of RFLP seq) | - |
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| ![]() Tomato-EXPIMP 2009 |
| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
CD34 was used as an overgo probe on plate 14 [well C6]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
A sequence
TGTCTCCAGAGTAGCACCTTCAAC
|
B sequence
CAAACCAGGGTTCATGGTTGAAGG
|
AB sequence
TGTCTCCAGAGTAGCACCTTCAACCATGAA
|
Marker sequence
GTCAGAAAAACCAAATAGAAAAAACAACCTCTCAGAAACAGATTAAGATC
AATATCCTCCCTTCAAATCATTAACCACATCATATGGTATGGGGGTAACT GTCTCCAGAGTAGCACCTTCAACCATGAACCCTGGTTTGGGTCCTAGTGG TTGCCTTTTTGTGCTGATGACTTCTCCTCTAGCCTTGGCGTCAGCCTTAA GTTGGTCATTCTTCTTGATCCTTTCCCTGACTTCTTCGGTGCATCGAGAT TGCTGGACATGCTCAATCCTCACATGGATCCTCTTTCTTAAGATCTTGTT ACGAACCTGCTTGTTGACTTCAACACCAACGGCGCGTTTGGTAACATTCC AAACACGACCAGTACGTCCATGGTAGAACTTGTGAGGCATTCCCTTGTGA ATAGCACCATTCACCTTGATATCAACATAATCTCCGATTTTGAAAATCCT CAAGTAGGTCGAAAGTGCGATGGTACCCTTCTTCCTGAAGGCGCGAGAGA ATGAATCTCTCG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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