SGN Marker T0801
SGN-M1610
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 1.06.1.05
Tomato EST read: TMEAZ44TH
Arabidopsis best BAC match: AC025781.6
Arabidopsis position: 1.0771000
Arabidopsis identities: 0.690
Best GenBank protein hit: AAB42144.1
Evalue: 6.2e-86
Identities: 0.669
Description: acetyl-CoA carboxylase [Medicago sativa]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAZ44TH
Arabidopsis best BAC match: AC025781.6
Arabidopsis position: 1.0771000
Arabidopsis identities: 0.690
Best GenBank protein hit: AAB42144.1
Evalue: 6.2e-86
Identities: 0.669
Description: acetyl-CoA carboxylase [Medicago sativa]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Eggplant-COSII |
| ![]() Pepper-COSII |
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| ![]() Tomato-EXPEN 2000 |
| ![]() Eggplant-LXM 2002 |
Other PCR data |
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Overgo hybridization and physical mapping |
T0801 was used as an overgo probe on plate 4 [well C8]
Plausible BAC Matches: None
Overgo Sequences
A sequence
AAACCCGTGAGACACAGCTTTTGC
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B sequence
ATCTGCGTGTATACGGGCAAAAGC
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AB sequence
AAACCCGTGAGACACAGCTTTTGCCCGTAT
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Marker sequence
TGGTTGTGGACAGTAAGATCAATTCAGACCACATCGAAATGTATGCGGAA
CGGACAGCCAGGGGAAATGTCCTTGAGCCGGAAGGTATGATTGAAATTAG ATTCAGAACAAAAGAACAGCTCGAGTGCATGGGTAGGACTGACCAACAGC TTATCAATCTCAAGTCAAAGCTTCAGGAAGCCAAGACCGCAGGGGTATAC GCTAATGTTGATGCCCTAGTGAAGCAAATTAAAACCCGTGAGACACAGCT TTTGCCCGTATACACGCAGATAGCTACAAAGTTTGCAGAGTTACATGATA CTTCGTCAAGAATGGCGTCCACGGGGGTGATCCGTAAAATAGTAGATTGG GAAACTTCTCGTTCATTCTTTTACGGACGTCTGCTTCGAAGAGTAGAGGA GGAAATGTTGGTCAAAACTGTGAGGAATGCTGCTGGTGACCAGCTTTCTT ATAAATCTGCTATGGGTATGGTGAAAAGCTGGTTTTTGGATTCAAAACAA GGCAATGTAGATGCTTGGATCGATGATGAAGCCTTTTTCTCATGGAAGAA TGACCCCAAGAACTATGAAGAACAACTACAAGAATTGCGGGTGCAAAAGG TACTACTTCAGCTATCGAAGATTGGTGATTCGACATTGGATTTACATGCC CTACCACAAGGTCTTCTTTCCCTCCTACAGAAGGTCGAGCCAGCAACACG AGAA |
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User comments |
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