SGN Marker T0964
SGN-M1685
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 98
Tomato EST read: TMEAW27TH
Arabidopsis best BAC match: AB006697.1
Arabidopsis position: 5.0150000
Arabidopsis identities: 0.933
Best GenBank protein hit: BAB10014.1
Evalue: 2.5e-68
Identities: 0.934
Description: GTP-binding protein LepA homolog [Arabidopsis thaliana]
Comment: compare with TMEAU34TH
More information about COS markers can be found on the COS markers page.
Tomato EST read: TMEAW27TH
Arabidopsis best BAC match: AB006697.1
Arabidopsis position: 5.0150000
Arabidopsis identities: 0.933
Best GenBank protein hit: BAB10014.1
Evalue: 2.5e-68
Identities: 0.934
Description: GTP-binding protein LepA homolog [Arabidopsis thaliana]
Comment: compare with TMEAU34TH
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T0964 was used as an overgo probe on plate 9 [well B1]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TGCTGCATGTGAAGGTGCACTACT
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B sequence
GGACGCATCAACTACAAGTAGTGC
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AB sequence
TGCTGCATGTGAAGGTGCACTACTTGTAGT
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Marker sequence
AAAGCAAACGCGGCGACGGAGCTCATTCCGTACGACGGAGGCGGCAACGG
AGGCGTAGTAGCTTGCGTGTGGATTGCCAAGCAGCTGCGACTGACCTCGA AGCCACAGCTCGCGCCGGGAAAGACCGTCTGTTGAAGGTACCAATATCAA ATATAAGGAATTTCTCAATAATAGCACATATTGATCACGGGAAATCAACG TTGGCAGATAAGTTGCTGCAAATGACGGGAACCGTAGAGAGCCGAGACAT GAAGGAACAGTTTCTAGATAATATGGATTTGGAGAGAGAAAGAGGCATCA CTATCAAATTGCAGGCTGCTCGAATGCGTTTCATTTATGAAAATGAGCCA TATTGCCTTAATCTGATTGACACTCCAGGTCATGTAGATTTCTCGTATGA GGTCTCTCGGTCTCTTGCTGCATGTGAAGGTGCACTACTTGTAGTTGATG CGTCCCAGGGAGTAGAGGCGCAAACCCTGGCTAATGTGTATTTAGCATTG GAAAACAATCTTGAGATCATCCCGGTTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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