SGN Marker T1066
SGN-M1737
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 1.07.01
Tomato EST read: TFBAN39TH
Arabidopsis best BAC match: AC002335.2
Arabidopsis position: 2.2360000
Arabidopsis identities: 0.866
Best GenBank protein hit: AAB64312.1
Evalue: 2.4e-59
Identities: 0.881
Description: biotin synthase (Bio B) [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBAN39TH
Arabidopsis best BAC match: AC002335.2
Arabidopsis position: 2.2360000
Arabidopsis identities: 0.866
Best GenBank protein hit: AAB64312.1
Evalue: 2.4e-59
Identities: 0.881
Description: biotin synthase (Bio B) [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1066 was used as an overgo probe on plate 5 [well B1]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TTGTCAGCTTCAGCAGCTGCAGTA
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B sequence
TACATCGTTCCGCTTCTACTGCAG
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AB sequence
TTGTCAGCTTCAGCAGCTGCAGTAGAAGCG
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Marker sequence
GGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCT
GCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGAT GATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTC AGTCGCGTGNNNNGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTA GAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGA TGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATG GCGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGC ACTTTGCTGTCTATTAAGACAGNNNNATGCAGTGAAGATTGTTCGTATTG TCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGA ATAAGGATGCAGTCTTGGAAGCAGCACGAAAGGCGAAAGAGGGAGGTAGC ACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAAC CAAT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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