SGN Marker T1105
SGN-M1765
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 1.06.04
Tomato EST read: None
Arabidopsis best BAC match: AB017070.1
Arabidopsis position: 5.1390000
Arabidopsis identities: 0.797
Best GenBank protein hit: BAB10591.1
Evalue: 3.2e-69
Identities: 0.715
Description: enoyl CoA hydratase-like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: None
Arabidopsis best BAC match: AB017070.1
Arabidopsis position: 5.1390000
Arabidopsis identities: 0.797
Best GenBank protein hit: BAB10591.1
Evalue: 3.2e-69
Identities: 0.715
Description: enoyl CoA hydratase-like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1105 was used as an overgo probe on plate 1 [well E10]
Plausible BAC Matches: P299J08, P111J02
Non-Plausible BAC matches
Overgo Sequences
A sequence
TGAATTCCCCAAAGCCATCTCCTC
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B sequence
GGGGTTTTGATCGAGTGAGGAGAT
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AB sequence
TGAATTCCCCAAAGCCATCTCCTCACTCGA
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Marker sequence
GCAAATAATGGAGGAATACAAATCACTGAAAATCATTCAAAAATCTCCAA
ATTCTCTTGTTTATTACCTGTATCTCAACCGACCCACACACCTCAACGCT CTCTCACAAGATTTCTTCACTGAATTCCCCAAAGCCATCTCCTCACTCGA TCAAAACCCCGATGTCGCCGTTATCATCCTCGCTGGCTCCGGCAAGCACT TCTGTTCCGGCATCGACCTCCATACCCTAGGTGATGTCTTCAAAGAAACC GACGCCGTTGATTGTGGCCGTAAAGTTGAGAGACTCCGGCGACATATCAA GTTTCTTCAGGAGGCTATTACTGCCTTAGAGTGTTGCCGTAAACCGGTGA TTGCTGCTGTCCATGGCGCATGTATCGGTGGTGCGATTGATATCATTACT GCCTGTGATATTAGGTATTGTTCTACTGATGCTTTTTTCTCAGTGAAAGA GGTGGATTTAGCTATTACGGCTGATCTCGGGACACTTCAGAGGCTTCCCA GTATTGTTGGGTTTGGAAATGCTATGGAGTTGGCTTTAACTGG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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