SGN Marker T1132
SGN-M1785
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TFBBD39TH
Arabidopsis best BAC match: AF000657.1
Arabidopsis position: 1.0490000
Arabidopsis identities: 0.721
Best GenBank protein hit: AAB72162.1
Evalue: 5.7e-18
Identities: 0.721
Description: probable thiamin biosynthetic enzyme [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBBD39TH
Arabidopsis best BAC match: AF000657.1
Arabidopsis position: 1.0490000
Arabidopsis identities: 0.721
Best GenBank protein hit: AAB72162.1
Evalue: 5.7e-18
Identities: 0.721
Description: probable thiamin biosynthetic enzyme [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1132 was used as an overgo probe on plate 8 [well D8]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
TTTTGCACGTCAAGGCGATGCAAG
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B sequence
GTGGCAAACTAACCGTCTTGCATC
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AB sequence
TTTTGCACGTCAAGGCGATGCAAGACGGTT
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Marker sequence
TTGCCATTCCTTCGCTTGCTACCCTAGGGTATTTACGAAGCTGGCGGCTG
CTATGAAAAAAAACTACACTCGATTCTCATATGAATTTCAATTGTTAGAT TCCAGTTCTGTTGAGTCCCGGCGTAGCTTGTATCAAAAGCTTTCATCAGT ATAGGTTTTTGCACGTCAAGGCGATGCAAGACGGTTAGTTTGCCACGCCT ACGTCGTGCGATGAGTCCAAAGTTAGAGTTCCTCATGTTCTGACGGTTGC CGGGTCCGATTCCGGCGCCGGCGCCGGAATTCAAGCGGATATCAAGGCTA GTGCTGCTCGGGGAGTGTATTGCTCCACTGTGATCACGGCTGTTACTGCT CAAGATACCGTAGGGGTTCAGGGTGTGAACATTGTGCCTGAGGATTT |
| Genomic location of T1132
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| User comments |
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