SGN Marker TG454

SGN-M18

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1400
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG454 image not available
Forward sequence
TATAATTTTGTTATCACAAGCACATATCAAGAAATAGCTGGAAGGTAAGAATTAGAGAGAATAAGTAATGCATTAATATGATAGAATTGA
ATACACATCAGAAATCCAGTTATGTATTTGCTCAAATTATTGAAATTTCATGGATCTCATTCTTATGTGCTAACATTTGCAGCAAAGACA
GGCCAGGGCAATATGAAAGTCACAGTGCATTTACCCTTCCAGGGCTTTATAGAGTTGCTTCAGGCATCAATGTCTTTGATCCTAAATTTA
ACATTGCTGCTCCTGGGGCAGACCAGTCAGTATATTTCCCTTACACAGAAAAGCAGAAGCGTTTGACTGATTTCCGACCTGCCATTGAGA
AGCTTCTTTTTAGTAAAGTGGATAATGACGAGCACATGTAAGTCTTAGTGCTCAAACTTCAGTTTAGTGCCAATAGGAATATCCCACAGT
TCTACGTATTAATGTTTTACTTCTTTCAACCACAGTGGATATTTAGAAGACAGAACGAAGCCTATCCTCTTCACCATGGCAAGGCTGGAC
ACAGTGAAGAACACAACTGGACTAACTGAATGGTTTGGCAAGAACAAGAAGCTCAGA
Reverse sequence
CAAGTGTAATTTAGGAAGCAAAATAAGAAAAGTATATCTCATAAGGATGTTTGGAGTAGAATGTAATGCAGGCATGCAGAAATATACCAA
GTTTCTGAACTCGAGATTGTAGAAAGTATCGATGTATCTTTGCTTTGCTTGTTTCTGATCTTTGTACAATGTCCTCCAAAAAGTGTAGAT
TGACCCCATATTCAATACCTTGTTTGCATAGATCTTCCATGTGTAACTGCAAAATATAAGGATTAAGAAAATTTCAACCAGATATATGCC
TCTCTGCAATTTGAACAATTGTTTATTTGTGAGTTACCATTCATATATACGCTTTAGACCCTGGGCTGAAATCCTGTTCCAATGCTCAGG
ATCCTCCTTGCACTTCTGGAAAAAATTGGCAATTTTGTTGCTTGATTCATCTCCATTATTTGGATCAATATGGAAGCCTGAAATCCCGTC
AACAATAATCTCAGCAGGGCCGCCTTGGCTGGTAGCGAAGGTTGGTAATCCACAGTTCATTGCTTCAATGACTGTAAGGCCAAATGCTTC
ATATAAAGCAGGCTGCACAAAAGCTCCTTTTGAATCTGCTATTGTGCGGTAGAGTTCGCTATTCCTGTATCTGTCAGTCTGAGCTGCTA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U165128345 (54.8% of RFLP seq)-
Mapped locations  
Map: Tomato QTL map   
Map version
137 (location: 53893)
Chromosome
2
Position
46.40 cM
Confidence
uncalculated
Protocol
RFLP

Dry_matter_weight_dmw2_1 Titratable_acidity_ta2_1 Eugenol_content_eug2_1 Fruit_weight_fw2_1Soluble_solid_content_ssc2_1 Sugar_content_suc2_1 3_Methylthio_propanal_content_mta2_1 Hex_3_en_1_ol_content__x3o2_1 Fruit_diameter_fd2_1 Color_a_a2_1 Dry_matter_weight_dmw2_2 Sugar_content_suc2_2 Soluble_solid_content_ssc2_2 Color_L_L2_1 Fruit_weight_fw2_2Titratable_acidity_ta2_2 Dry_matter_weight_dmw2_3 Color_b_b2_1Fruit_diameter_fd2_2 Elasticity_ela2_1 Carotene_content_car2_1 2_Isobutylthiazole_content_ibt2_1
Tomato QTL map

Map: Tomato-EXPIMP 2009   
Map version
126 (location: 53557)
Chromosome
2
Position
55.36 cM
Confidence
uncalculated
Protocol
RFLP


Tomato-EXPIMP 2009

Map: Tomato-EXPEN 1992   
Map version
28 (location: 7756)
Chromosome
2
Position
64.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG454 was used as an overgo probe on plate 6 [well A6]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

P009P20,   P112N16,   P050P06,   P108E19,   P051C08

 Overgo Sequences

A sequence
GCAGAAGCGTTTGACTGATTTCCG
B sequence
CTTCTCAATGGCAGGTCGGAAATC
AB sequence
GCAGAAGCGTTTGACTGATTTCCGACCTGC
Marker sequence
TATAATTTTGTTATCACAAGCACATATCAAGAAATAGCTGGAAGGTAAGA
ATTAGAGAGAATAAGTAATGCATTAATATGATAGAATTGAATACACATCA
GAAATCCAGTTATGTATTTGCTCAAATTATTGAAATTTCATGGATCTCAT
TCTTATGTGCTAACATTTGCAGCAAAGACAGGCCAGGGCAATATGAAAGT
CACAGTGCATTTACCCTTCCAGGGCTTTATAGAGTTGCTTCAGGCATCAA
TGTCTTTGATCCTAAATTTAACATTGCTGCTCCTGGGGCAGACCAGTCAG
TATATTTCCCTTACACAGAAAAGCAGAAGCGTTTGACTGATTTCCGACCT
GCCATTGAGAAGCTTCTTTTTAGTAAAGTGGATAATGACGAGCACATGTA
AGTCTTAGTGCTCAAACTTCAGTTTAGTGCCAATAGGAATATCCCACAGT
TCTACGTATTAATGTTTTACTTCTTTCAACCACAGTGGATATTTAGAAGA
CAGAACGAAGCCTATCCTCTTCACCATGGCAAGGCTGGACACAGTGAAGA
ACACAACTGGACTAACTGAATGGTTTGGCAAGAACAAGAAGCTCAGA
Genomic location of TG454  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D18 marker 18
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)