SGN Marker T1173
SGN-M1813
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 6.13.01
Tomato EST read: TFBBK51TH
Arabidopsis best BAC match: AC007396.6
Arabidopsis position: 1.1415000
Arabidopsis identities: 0.646
Best GenBank protein hit: BAA19252.1
Evalue: 1.7e-92
Identities: 0.871
Description: 21D7 (subunit of the 26S proteasome complex ) [Nicotiana tabacum]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TFBBK51TH
Arabidopsis best BAC match: AC007396.6
Arabidopsis position: 1.1415000
Arabidopsis identities: 0.646
Best GenBank protein hit: BAA19252.1
Evalue: 1.7e-92
Identities: 0.871
Description: 21D7 (subunit of the 26S proteasome complex ) [Nicotiana tabacum]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1173 was used as an overgo probe on plate 9 [well H4]
Plausible BAC Matches: None
Overgo Sequences
A sequence
AGCACCTCCTTCCAAATCCCTTTC
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B sequence
AGAAGGGTCAGCAGATGAAAGGGA
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AB sequence
AGCACCTCCTTCCAAATCCCTTTCATCTGC
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Marker sequence
CTCCAAGAAACAAGAAAGATGACTCAAGATGTGGAGATGGCCGACCAAGC
ACCTCCTTCCAAATCCCTTTCATCTGCTGACCCTTCTGTCTTGCCCCATT TGAAGGACATAGCATCGTTGATTGAGACTGGGGCATATGCTCGTGAGGTC AGGAGGATTTCCAGAGCTGTGAGGCTGACTATGGTACTGAGGAAGAAGCT AAAGGCTTCTTCACTAGGTGCTTTCCTCAATTTTGTTCTAGTGCCTGGAT CAGACGTGCATTCCCGGCTATCTTCCTTCCTACCCAAGGAAGATGAACAT GATATGGAAGTTGATAGTGCAACATCCGGAACTCTGGCATCAGTCAAGCA TTCTTTGCCAGAGCTTGAGATCTATTGCTACTTGCTTGTCTTGATATTCT TAATTGATCAGAAGAAATACGATGAGGCCAAGGCATGCTCCTCAGCAAGT ATTGCTCGTCTAAAAACCGTGAACAGGAGGACAGTTGATGTATTAGCATC TAGGCTTTATTTCTACTACTCTCTGTGTTATGAACTTACTGGTGATCTTG CCGAAATTCGAGGTAATCTCCTCTCATTGCACCGTATTGCAACATTACGC CGTGATGAGTTGGGTCAAGAAACTCTTCTTAATCTGCTATTGCGGAATTA TCTTC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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