SGN Marker T1261
SGN-M1874
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 2.01
Tomato EST read: TPTAE85TH
Arabidopsis best BAC match: AL132975.1
Arabidopsis position: 3.1193000
Arabidopsis identities: 0.931
Best GenBank protein hit: CAA58230.1
Evalue: 4.6e-75
Identities: 0.913
Description: triosephosphate isomerase [Petunia x hybrida]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPTAE85TH
Arabidopsis best BAC match: AL132975.1
Arabidopsis position: 3.1193000
Arabidopsis identities: 0.931
Best GenBank protein hit: CAA58230.1
Evalue: 4.6e-75
Identities: 0.913
Description: triosephosphate isomerase [Petunia x hybrida]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1261 was used as an overgo probe on plate 7 [well G1]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TGGGTTAAGAATGGCGGTGCTTTC
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B sequence
CACTAACTTCACCGGTGAAAGCAC
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AB sequence
TGGGTTAAGAATGGCGGTGCTTTCACCGGT
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Marker sequence
GAGAAACTTTAGATCTCATTTCTTGTTGTACAATTCCCGTGAATCCTTCG
TCTTCATCGTAAAAATGGGCAGAACTTTCTTCGTCGGCGGTAACTGGAAA TGCAATGGAACCAGTGAAGAGATCAAGAAGATAGTAGCGATACTCAATGC TGGTCAAGTGCCATCACAAGATGTTGTTGAGGTTGTTGTGAGCCCTCCAT TTGTATTTCTTCCTCTGGTCAAGAATGAGCTGCGATCTGATTTTCATGTT GCTGCCCAAAATTGTTGGGTTAAGAATGGCGGTGCTTTCACCGGTGAAGT TAGTGCTAATATGCTTGTTAATCTGAGCATTCCATGGGTCATTTTGGGTC ATTCTGAAAGAAGAGCCATTTTAGGTGAATCAAATGAGTTTGTTGGAGAC AAGGTAGCATATGCTCTTTCTCAAGGTTTGAAGGTAATTGCATGTGTTGG GGAGACTCTTGAGCAAAGAGAATCAGGATCCACCATGGATGTTGTTGCAG CACAAACAAAGGCTATTGCAGACCGAGTAAAAGATTGGTCAAATGTGGTG ATAGCTTATGAGCCTGTTTGGGCTATTGGTACTGGAAA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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