SGN Marker TG129
SGN-M191
Synonyms |
Locus associations |
RFLP details |
Insert size
2500
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG129 image not available
|
Forward sequence
AATTCTGATCGTGGCAGTCTCCTAGCATGTAGGAGCCACATGTACCATTAGGATTTCCAAAGCTGGCAAATTTGACAGAGGAAATATTAG
TATTTGTGGGGCATTTCAAACTTAGAGTTGGCCTGTTTTTGTCGTTCTCAATTTCACTTCCTTGCAGATTTTCAACATCAAAGGATGGAT GGTCCACTGAAAGATGACCACAAGCTCCAGAAACCTTTCGCATTGAGAATCTAATTTGAGAGGGATCTCCACCTATTTCCTCAAAGATAA TTAAGACATTTCCTGATGGCTTGAACCAAGATCGTGGCACATGATACCTAATTAACAAGCAAAATAAGAGAAATTCTACTTTAAAATATG GATGTATATAAAAAAGAGAAAACAACAAAAACTAGCATTAAGGTTGCAAACTGATGATACTACTTCGAACACTACTGGTCTTTAATCCAT AACTGGAAACAAAGAAATGACCCATTAAAAAGTATATAGGAGTTT |
Reverse sequence
GGGCTGAGTTAATGTTTTGGGATGTTAAAAGAGACTAATACTCTTCAAATATTGCATAGCTCTTATTTATTCCAAGGCTAGCCTTATTCC
AAATGCTTTTCCTTAGACTAACAGTACTTCGTTTTCTCTTTGAAGACAGCTGGAGCGTTTTATGAATGGATTGGAGCTGGTCCAACAAGT GTCAAAGTTGCAGGGTTCAAGACTGGGACTATGGACTTGACTGCGTCTGCTTGGACCTATAAGGTATTGCATTTTCCTTCAGTTAAGTTT GCACTCCAGCTTGCATCATTGTCAATCTAGGAAGCATGTATTCCTCTTTTTAAAGGTGTGTCACAGAATTGAAACTATTGGACATCCTCT TCCAATATTTGGGAAAATCCCTTTATTAATCATGGTAAGGTAATGACATTGTTAAAGTGGGCACTTGTGCTATTACCTCTTTTTTCTTTT AAGAGGAGAAGAGATTTAGGCTGAAGATCATGGAATGTATATGGAAGAAAGGACTCATTACTTCTATTTAGCTGTAT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U158091 | 1e-131 | 236 (47.7% of RFLP seq) | + |
SGN-U158091 | 2.8e-55 | 108 (20.5% of RFLP seq) | - |
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| ![]() Eggplant-RAD 2012 |
| ![]() Potato meta-QTL consensus map |
| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
TG129 was used as an overgo probe on plate 4 [well B2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
ATTCTGATCGTGGCAGTCTCCTAG
|
B sequence
ATGTGGCTCCTACATGCTAGGAGA
|
AB sequence
ATTCTGATCGTGGCAGTCTCCTAGCATGTA
|
Marker sequence
AATTCTGATCGTGGCAGTCTCCTAGCATGTAGGAGCCACATGTACCATTA
GGATTTCCAAAGCTGGCAAATTTGACAGAGGAAATATTAGTATTTGTGGG GCATTTCAAACTTAGAGTTGGCCTGTTTTTGTCGTTCTCAATTTCACTTC CTTGCAGATTTTCAACATCAAAGGATGGATGGTCCACTGAAAGATGACCA CAAGCTCCAGAAACCTTTCGCATTGAGAATCTAATTTGAGAGGGATCTCC ACCTATTTCCTCAAAGATAATTAAGACATTTCCTGATGGCTTGAACCAAG ATCGTGGCACATGATACCTAATTAACAAGCAAAATAAGAGAAATTCTACT TTAAAATATGGATGTATATAAAAAAGAGAAAACAACAAAAACTAGCATTA AGGTTGCAAACTGATGATACTACTTCGAACACTACTGGTCTTTAATCCAT AACTGGAAACAAAGAAATGACCCATTAAAAAGTATATAGGAGTTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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